| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1031 |
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| Symbol | |
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| ID | 8709341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 1166870 |
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| End bp | 1170625 |
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| Gene Length | 3756 bp |
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| Protein Length | 1251 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646483124 |
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| Product | phosphoribosylformylglycinamidine synthase |
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| Protein accession | YP_003374236 |
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| Protein GI | 283783482 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain |
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| TIGRFAM ID | [TIGR01857] phosphoribosylformylglycinamidine synthase, clade II |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTATTTC GCGTATATGT GGAAAAACGC ACTGGTTTTG ACGTTCAAGC GCAACAGCTT
TTACATGAGC TTAGGGAGAT TCTTGGCATA AGCGCGATTA CTTCCGCAAG AATTATTAAC
CGTTATGACG TTGAAGGTAT CAGCAAAGAT TTATTCGACA ATGCTGTGCA AACAGTATTA
AGCGAACCTC CAGTTGATAA TACTTACGAT TACTTGCCTA TTGAAACCGA CGAGCACGTA
TTTGCTGTAG AATTTTTGCC TGGTCAATTC GATCAGCGTG CGCAATCTGC TAGCGAATGC
ATTCAACTTA TTAGTCAAGG CGAACGCCCA ACAGTGCGCA CTGCTAGAGT AATCGCTTTA
AAAGGTGATC TTGACGAAAA AGCACTAAAC GATATTAAAC ACTACGTTAT TAATCCTGTT
GAAGCGCGAG AAGCTTCACT TGATGAGGTA AAAAGTTTAC AGCGAGAAGC AGTTGTGCCA
TCCGATGTAG AAGTAATTAG CTCATTTAAC GATTTAAACG AAGCTGGATT ACAAGACTTT
ATTAATACTC GCGGTTTGGC AATGGATTTG GCTGACGCAA AGTTCTGCCA GAAGTATTTC
CGTGAAGAAC ATAGAAATCC TACTATTACA GAAATTCGCG TTATTGATAC GTACTGGTCC
GACCACTGTC GTCACACGAC TTTTGGCACC GAGCTTACAG ATATTTCTAT TGACGATAAC
ACTGTTCAAG AAGCATTTAG CCGTTATCTT GATTTGCGAA AAGAACTAAA TCGCGAAAAT
AAGCCTGTTT GCCTTATGGA TATGGCAACT ATTGGCGCAA AATACTTAAA GCATACCGGC
GAGCTTAAAA ATTTGGACGA GTCAGAAGAA ATCAACGCTT GCACAGTAAA AGTTAAAGTG
GACGTAAACG GTCACAACGA AGATTGGCTA TTCCTGTTTA AAAACGAAAC ACATAATCAT
CCTACAGAGA TTGAGCCTTT CGGTGGAGCT GCAACTTGCA TTGGTGGCTG CATCCGTGAT
CCTCTTTCTG GACGCTCCTA TGTGTATCAA GCAATGCGCG TAACTGGTGC TGCAGATCCA
CGCACGCCTA TTAGCGAGAC TTTAAACGGT AAGCTTCCGC AGCGAAAAAT TGTAACTTCT
GCTGCCGCAG GATACTCTTC TTACGGAAAT CAGATTGGTT TAGCTACTGG CGAAGTACAC
GAGTTATACC ACCCTGGTTA TGTTGCAAAA CGTATGGAGG TTGGTGCAGT TGTTGCCGCT
ACCCCAGCCG ACCATGTGCG CAGAGAAACT CCAGCTCCTG GCGATGTGAT TATTCTTCTT
GGCGGACGCA CTGGTAGAGA TGGCATTGGC GGCGCAACTG GCGCTTCTAA AGCTCAAGAT
GTTGAAAGTA TTGAAGAGTG CGGAGCTGAA GTTCAAAAAG GTAATGCTCC TATTGAGCGA
AAACTTCAAC GACTTTTCCG ACGCAAGGAT GCTTGTCAAC TTATTAAGCG TTGCAACGAT
TTCGGCGCTG GCGGCATTTC TGTCGCAACT GGCGAAATTG CCGACAGCTT AACTATTAAT
CTCGACAAAG TTTCTAAAAA GTACGAAGGT CTCGACGGCA CTGAGCTTGC TATTTCTGAA
TCTCAAGAGC GCATGGCTGT CGACGTTGCA TCAAGTGATG CTGAAGAATT TTTGAAGTAT
GCTCGTGAAG AAAATCTTGA AGCAGAAATA ATAGCGACTG TTACTGAAGA AGCACGAATG
CGAATGACTT GGCGTGGAAA AACCATTGTT GACTTAAGCC GCGCATTCTT GGCTTCTAAT
GGCGCTGCAA AACAGCAGAT ATTGCATATT GAAAGTGGAG AATCTTACGA AACTCCATGG
CAGCATCAGT CAGATTTGCC GTTAGAAAAG CGCATGCATA ACTTAGTTTC GGATATTAAT
ATTGCTTCAA ATAAAGGCTT ATCTGAACGA TTTGATTCTA CTATTGGTGC TGCTACTGTG
CTTATGCCTT TTGGCGGTCG TCGCCAGCTT ACTCCTGCTC AAGCCATGGT TGCTAAATTC
CCAGTATTTG GCGAAACAAA CACAACTTCC GCAATGGCTT GGGGATTTAA TCCGTATTTG
ATGGAAAAGA ATCAGTTTAC TGGAGCTTAT GTTGCGGTTG TTGAATCATT GGCAAAGCTA
GCAGCTAGCG GTTTCACTCG CGAACGTGCT TACTTGAGTT TACAAGAATA TTTTGGCAAG
CCTCACGATA TTCCAGAGCG TTGGGGAAAG CCAGCTGCAG CAGTTCTTGG TGCTTTAAGT
GCACAGCTTG ATTTTGGCGT TGGTGCTATT GGCGGCAAGG ATTCCATGAG CGGCAGTTTT
GAGAATCTGG ATGTGCCACC AACTTTGATT TCGTTTGCTG TTTCTACTGG AGATGCACGT
TTAACTGTTT CACCTGAATT TAAGGGTGTA AATCATAAAG TTATACGTAT TGCTCCAAAA
TATAAATCCG ACGGAATTAC TCCAGAAAAA GAAAGCTTCC TGAAAGCATT AGAGATTGTA
GAAAATATTA CGAAAAACAA GCAAGCTCTT GCTATATCTA CTCCTGGCTA CGGTGCTAGT
GCAGAAAGCT TATTCAAAAT GACGCTTGGA AATCATATTG GTCTTAAATT ATTCAACAAT
TTAAGCGACG ATGATTTATT TAAGCTAGCA TATGGAAGCT TCTATGTTGA GCTTAAAGAA
GACGCTGAAG TTCCGTCGTT AGCTAATACA AGCTTGGTTG ACGTTGAGCT TGTTGGCGAA
ACAACTGAAA ATTACGCGAT TACTTCATCA AATGGCGAAG AAATTGATTT AAGTGATTTA
CAAAAAGTTT GGGAAAGCGC ACTTTCCTCA ATCTTCCCAT ATAAAAAGCC TGGCGAGATT
GTAGAAACTA TTAATAGCGA AACTAATGTT TCTACTACAG ACCGCATGCA CACAGGAAAA
CTAAAGCCGC TTTCGCATCC TCGCGTTATT ATCCCAGTTT TCCCTGGAAA TAATTGCGAA
TACGATACTC AAGCTGCTTT TGAAAAAGCT GGAGCAGACG CTCATACGCT TATTATTAAT
AATTTAAGCG CAAAAGATAT TGCACGATCA GCTGAGAGAT TGGTTGAAGA GATTAAAAAG
AGTCAAATTG TAATGATTCC AGGAGGCTTC TCCGGAGGCG ATGAGCCGGA CGGTTCTGCG
AAATTCATTA CAGCATTCTT TAGGAATCCA GCAGTAACAG ACGCAGTTCG TGACTTGCTT
AATAATCGTG ACGGTTTAAT GCTTGGAATT TGCAACGGCT TCCAAGCGCT TATTAAGCTT
GGTCTTGTGC CTTTTGGTGA CATTATCCCA ATAAATTCCG AATGCCCAAC TCTTACCTAC
AACACTATTG GCAGACACCA AAGTAGGATT GTTCGCACTA GAGTTGCTTC AAATCTTTCA
CCATGGTTAG CAAATACGCA AGTTGGAGAC ATGCATACTG TTGCAATTTC TCATGGAGAA
GGTCGCTTTA TTGCAACGCC AGAAGTTATG GAAAAGCTTA TTAACAACGG CCAAGTAGCT
ACGCAATACG TTGATAGCAA TGGCGTTCCA AGCATGAGTT TGAATGTGAA TCCAAACGGA
TCGATTATGT CCGTTGAAGG AATTACCAGC CCAGATGGTC GAGTTTTTGG AAAAATGGGA
CATTGCGAGC GCGCAGGTCG TGACTTGTAT GTCAATATTC CTGATTTCCA CGAGCAACCA
TTGTTTGAAG CTGGTGTTGA ATATTTCACT GCATGA
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| Protein sequence | MVFRVYVEKR TGFDVQAQQL LHELREILGI SAITSARIIN RYDVEGISKD LFDNAVQTVL
SEPPVDNTYD YLPIETDEHV FAVEFLPGQF DQRAQSASEC IQLISQGERP TVRTARVIAL
KGDLDEKALN DIKHYVINPV EAREASLDEV KSLQREAVVP SDVEVISSFN DLNEAGLQDF
INTRGLAMDL ADAKFCQKYF REEHRNPTIT EIRVIDTYWS DHCRHTTFGT ELTDISIDDN
TVQEAFSRYL DLRKELNREN KPVCLMDMAT IGAKYLKHTG ELKNLDESEE INACTVKVKV
DVNGHNEDWL FLFKNETHNH PTEIEPFGGA ATCIGGCIRD PLSGRSYVYQ AMRVTGAADP
RTPISETLNG KLPQRKIVTS AAAGYSSYGN QIGLATGEVH ELYHPGYVAK RMEVGAVVAA
TPADHVRRET PAPGDVIILL GGRTGRDGIG GATGASKAQD VESIEECGAE VQKGNAPIER
KLQRLFRRKD ACQLIKRCND FGAGGISVAT GEIADSLTIN LDKVSKKYEG LDGTELAISE
SQERMAVDVA SSDAEEFLKY AREENLEAEI IATVTEEARM RMTWRGKTIV DLSRAFLASN
GAAKQQILHI ESGESYETPW QHQSDLPLEK RMHNLVSDIN IASNKGLSER FDSTIGAATV
LMPFGGRRQL TPAQAMVAKF PVFGETNTTS AMAWGFNPYL MEKNQFTGAY VAVVESLAKL
AASGFTRERA YLSLQEYFGK PHDIPERWGK PAAAVLGALS AQLDFGVGAI GGKDSMSGSF
ENLDVPPTLI SFAVSTGDAR LTVSPEFKGV NHKVIRIAPK YKSDGITPEK ESFLKALEIV
ENITKNKQAL AISTPGYGAS AESLFKMTLG NHIGLKLFNN LSDDDLFKLA YGSFYVELKE
DAEVPSLANT SLVDVELVGE TTENYAITSS NGEEIDLSDL QKVWESALSS IFPYKKPGEI
VETINSETNV STTDRMHTGK LKPLSHPRVI IPVFPGNNCE YDTQAAFEKA GADAHTLIIN
NLSAKDIARS AERLVEEIKK SQIVMIPGGF SGGDEPDGSA KFITAFFRNP AVTDAVRDLL
NNRDGLMLGI CNGFQALIKL GLVPFGDIIP INSECPTLTY NTIGRHQSRI VRTRVASNLS
PWLANTQVGD MHTVAISHGE GRFIATPEVM EKLINNGQVA TQYVDSNGVP SMSLNVNPNG
SIMSVEGITS PDGRVFGKMG HCERAGRDLY VNIPDFHEQP LFEAGVEYFT A
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