| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1029 |
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| Symbol | |
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| ID | 8710076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 1164486 |
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| End bp | 1165769 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646483122 |
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| Product | phosphoribosylglycinamide synthetase, ATP-grasp (A) domain protein |
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| Protein accession | YP_003374234 |
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| Protein GI | 283783480 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0027] Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) |
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| TIGRFAM ID | [TIGR01142] phosphoribosylglycinamide formyltransferase 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTT CTGAGCAAAA TCAACGCATT TTTGGCGTAA CTGCAAACAG CAACAACACG
ACAGCACTTC TTCTTGGCTC AGGCGAGCTT GGCAAGGAAA TTGCGATTGA GCTTATGCGA
CTAGGCGTGC GAGTATGCGC TGCCGATAGC TACAAAAACG CTCCTGCAAT GCAAATAGCT
CACGAATACC ACGTGCTAGA TATGTCAAAT CCGCAAGAAT TGCAAGAACT TATTTCAAAT
GTGAATCCTG ACATTATTAT TCCAGAAGTT GAAGCTATTG CTACTGAAGT TTTGAAAGAT
GCTGCTAAAA AGAATATTCA AGTTGCTCCT AGCTCAGATA TTGCCGCGAT TGCAATGGAT
CGCGAGCGCT TGCGTAGAAT TGCGCACGAA GATTTAGGCC TGCCTACTAC ACCGTATTGT
TTCGCTTCAT CTTATGAAGA GTTAGAGGAT GGAGCTAAAA AAGTTGGCTA CCCTTGTGTA
GTTAAGCCTG TTATGAGCTC TTCTGGTCAC GGTCAATCAA TAGTTCGTAG TTCTGAAAAT
TTGCTTGCAG CTTGGAATGA AGCTCAGCAT GGCAGGCGTG CAGCAGCTGG GCATGAAAAT
GAGTGTTCAC GCGTTATTGT TGAAGCTTTA GCTCCGCTTG ATTATGAGCT TACAGTACTT
ACAATAAGCT CTTGCGCAGG AATTACTACT TGTGAGCCGA TCGCTCAGTG TCAGCAAGAC
GGAGACTATA GAGAATCTTG GCAGCCTGCA AATATTCCTG AATCGATCCG CACTAATGCG
AAAGATATTG CAAAGCGTGC TGTAGAAGGT TTGACTGATA TTGCGCAAGA AGCTGGCGAA
ACAGGTTGGG GCATTTATGG AGTCGAACTA TTTGTATTAA AAGATGGCTC ACTGTTATTT
AACGAGCTTT CACCTCGCCC ACACGATACT GGCATGGTAA CTATGATTTC ACAGCACTAC
AGTGAATTCG CATTACACGC ATTGGCTATT TTGGGAGTCC CAATTACAGC TAACTATACT
GAACTTTCTT TGAAAAATAA TGAAGTTGCA GCAAGTCACG CCATTGTTAT TAAAGCGGAA
GGATCTGTTG GTTTTACGAA TATTGCTCAA GCTTTGCAAT CTGGCGAAAA TCATCGATGC
AACTTGCGTA TTTTTGCTAA GCCTTCTGTA CATGGTCACA GACGAATGGC AGTTTCTTTA
GCTACTGGAT TAACGCAGGA AGAAGCTAGA GAAAATGCGA CACGCATCGC TATGTCGCTA
AAAACTATAC AAACGAATGC TTAG
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| Protein sequence | MSFSEQNQRI FGVTANSNNT TALLLGSGEL GKEIAIELMR LGVRVCAADS YKNAPAMQIA
HEYHVLDMSN PQELQELISN VNPDIIIPEV EAIATEVLKD AAKKNIQVAP SSDIAAIAMD
RERLRRIAHE DLGLPTTPYC FASSYEELED GAKKVGYPCV VKPVMSSSGH GQSIVRSSEN
LLAAWNEAQH GRRAAAGHEN ECSRVIVEAL APLDYELTVL TISSCAGITT CEPIAQCQQD
GDYRESWQPA NIPESIRTNA KDIAKRAVEG LTDIAQEAGE TGWGIYGVEL FVLKDGSLLF
NELSPRPHDT GMVTMISQHY SEFALHALAI LGVPITANYT ELSLKNNEVA ASHAIVIKAE
GSVGFTNIAQ ALQSGENHRC NLRIFAKPSV HGHRRMAVSL ATGLTQEEAR ENATRIAMSL
KTIQTNA
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