Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_1021 |
Symbol | recA |
ID | 8709142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | - |
Start bp | 1151243 |
End bp | 1152382 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 646483114 |
Product | RecA protein |
Protein accession | YP_003374227 |
Protein GI | 283783473 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0468] RecA/RadA recombinase |
TIGRFAM ID | [TIGR02012] protein RecA |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCAAA CAAAAAGTAA AGGCAGTATT AATCGCCTTA TTGATGCGGA TAAAACAGAT CCACGTCGCC AAGCAGCGTT AGAAACTGCT TTAGCCAATG TTGAACGACA ATATGGAAAA GGTTCTGCAA TGCGCTTAGG TGATAGACCT ATGCAAGATG TAGAAGTTAT TCCTACTGGT TCATTAGCGT TGGACACTGC TTTGGGGATT GGCGGTGTTC CTAGAGGGCG AATAGTTGAA GTCTACGGTC CTGAGTCTTC TGGTAAAACA ACTCTTGCTT TGCATATTGT TGCAAATGCT CAAAAAAATG GTGGGGTAGC GGCATTTATT GATGCTGAGC ATGCGTTGGA TCCTGTCTAT GCGAGAAAGC TTGGAGTAGA CACGGATGCT CTTATTGTTT CTCAGCCAGA TAATGGTGAG CAGGCATTGG AAATTGCTGA TATGCTTATT CGTTCTGGTG CGTTAGATGT TATTGTTGTT GATTCTGTAG CGGCATTAGT TCCTAAAGCT GAAATCGATG GCGATATGGG AGATAGCCAT GTGGGCTTAC AAGCTCGCTT AATGAGTCAG GCGTTGCGTA AGATGACTGG TGCTCTTTCA CAAGCTGGCA CTACTGCTAT TTTTATTAAT CAGCTTCGTG AAAAAATTGG CGTATTCTTT GGTAACCCTG AAACTACCAC TGGTGGTAAA GCTTTGAAGT TCTATGCGTC TGTGCGCATG GATATTCGCA GAGTTTCTAC TATTAAAGAG GGCGAAGAAG CTGTTGGTAA CCGAACTAAA GTTAAGATTG TCAAGAATAA AATGGCTCCG CCTTTCAAAA CTGCTGAGTT TGATGTTCTT TACGGAGAAG GCATCTCGAC TGAAGGTTCT GTTATCGATA TGGGACTGCA AGCTGAAGTT ATTAAGAAAT CTGGTTCTTG GTTTACTTAT GACGGTGAGC AGCTTGGACA AGGTCGTGAA AACGTCCGTA AGTTCTTGAA AGATAATCCA GCTATTACTG AAGAAATTAG CGAAAAAGTC AAAGCTTTGT TAGGTTTAAT GCATACTGAA GATCAATTCG CTGAAGATTC TGAACTAGAT CAATTCGATG ATGATTCTGT AGCTAAAAAT TCTGCACAAA AGTCATCCGA ATCGAAGTAA
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Protein sequence | MAQTKSKGSI NRLIDADKTD PRRQAALETA LANVERQYGK GSAMRLGDRP MQDVEVIPTG SLALDTALGI GGVPRGRIVE VYGPESSGKT TLALHIVANA QKNGGVAAFI DAEHALDPVY ARKLGVDTDA LIVSQPDNGE QALEIADMLI RSGALDVIVV DSVAALVPKA EIDGDMGDSH VGLQARLMSQ ALRKMTGALS QAGTTAIFIN QLREKIGVFF GNPETTTGGK ALKFYASVRM DIRRVSTIKE GEEAVGNRTK VKIVKNKMAP PFKTAEFDVL YGEGISTEGS VIDMGLQAEV IKKSGSWFTY DGEQLGQGRE NVRKFLKDNP AITEEISEKV KALLGLMHTE DQFAEDSELD QFDDDSVAKN SAQKSSESK
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