| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0967 |
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| Symbol | |
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| ID | 8709273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 1104887 |
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| End bp | 1105750 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646483062 |
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| Product | hypothetical protein |
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| Protein accession | YP_003374177 |
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| Protein GI | 283783423 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.621183 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCG AACTCACCAT TAGCGAACAA AAAGACATAG CAGCACTATA CGCGCAATCC
ACGCTTGTGC CAGAAGCTTT TCGCGGCAAG CCAGCCGACG TTTTCGTAGC AGTAACACTA
GGGCAAAGCG TTGGGATATC GCCTATACAA AGCCTAAGTG AAATCAACGT AATAAAAGGC
AAGCCTACAA TGAGCGCAAG CCTTATCGCA GCACAAGTCC GTAAAGCAGG ACACAAGCTA
CGAATCGAAG TATGCGAAAC CCCCGGTCAG GAATCCGCTA CATGCACAAT CATTAGACGC
GACGACCCCG ACCACCCGTT TATATCAAAA CGCGATAGAG CATGGGCACA ACGCATGGGA
CTGTTAAACA ACAGCAACTA TGTTAAACAA CCGGCAACAA TGCTCAAAAA GCGAGCCATC
ACAGACTGTG CGCGCGACGC TTGCAGTGAA GCATTATGCG GCATCGACTA TTGCAAAGAA
GAAATGAGCG ACTTCGATGA AGTTAAAGCG ACAGTAGAAG AACACGAAGA AACTACTGAA
TCCCCTAATG TTGTTGAAGC TGAAATCGTC GAAGAAAAAC CACAACAGTC CCCCAAAGTG
CCGCTTGCAA CACAAGAGCA GAGAGAACAG ATTCTCGCAA TGCTTGCAGA AGCCGGAATC
CGCGACAAGC TCAAAGCAAT AAACTACTTG AAACATTTAG TTCCCCACAT GACTCCAACG
AAAGAGGAAG CAGAATTCCT AATCACAAAC CGTGAGACTG TGATTAAAAA AGCTAGCGCG
TACGTGCGCG CTCAGAGCAC GAAACGCACT CAGGAAGCAG CACAGCAACA GCAAGCAGAA
CAACAACAAG TAAAGGAACA GTAA
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| Protein sequence | MSSELTISEQ KDIAALYAQS TLVPEAFRGK PADVFVAVTL GQSVGISPIQ SLSEINVIKG
KPTMSASLIA AQVRKAGHKL RIEVCETPGQ ESATCTIIRR DDPDHPFISK RDRAWAQRMG
LLNNSNYVKQ PATMLKKRAI TDCARDACSE ALCGIDYCKE EMSDFDEVKA TVEEHEETTE
SPNVVEAEIV EEKPQQSPKV PLATQEQREQ ILAMLAEAGI RDKLKAINYL KHLVPHMTPT
KEEAEFLITN RETVIKKASA YVRAQSTKRT QEAAQQQQAE QQQVKEQ
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