| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0943 |
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| Symbol | |
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| ID | 8709756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1083702 |
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| End bp | 1084490 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 646483040 |
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| Product | comEA protein |
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| Protein accession | YP_003374156 |
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| Protein GI | 283783402 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGACT TTGAACAGAA TTTTGGGCAG AATCATGAGC ATAATTTTAG GCTTAATAAG
CCTGCGTCTG ATTTGCCTAG GAGACGAATT GCAACGTCTT TAGAAGAATT TTCTAACAGC
AATTTTGATA AAAATTTTAG TGACGACTAT TGCGAAAAAG CTTGTAATTC TTTTGATGAA
GAAATTATAA GTAGAAAAAC TCATCCTAGA TTTCACATGA AGCCTGTACA TACGCTTGCT
TTAATGCTGA TACTAGTTGC AGCTCTTTGT GCAAGCCTGA CAATGCTCAT TTCTCAATCC
TTAACATATC AACGAGTTCA GAACGAAAAA GCAGGCGCGT TTGCAATAGA AAACGACGAT
ACTAGTCGCG AAAAGCCTTC TTTTAATAAT GTAAAAGATA AGAATAAAAA TGATGATGAA
GAAAAAAGCG TAAGTAATGA AAGCGACGAA AACAGCGGAA GTGATGTAAG TGACGGAGAT
GATGTAAGTA AAGGCAATAA CGGAAGTAAA AGCAACAACA AAAGCAACAA AGGTGACAGT
AATAACAAAA GCGACAGAAG CAACGAGAAT ACTGCTTCTC ATCAAAGTAA CACTGGCAGA
ATCAATATAA ACACTGCAAC GCTTGATCAG CTACAAACCT TAAAAGGAAT CGGACCCAAA
ACTGCTGCGC GCATTATTGC TCAGCGTAAA AGAGTTGGTT ATTTTCGCAG TTTAGAAGAT
TTGATGCAAA TTAAAGGAAT TGGGCCTAAA ACCTTGAATA AATTCCGTGG GAATGTTGAC
GTCAAATAG
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| Protein sequence | MEDFEQNFGQ NHEHNFRLNK PASDLPRRRI ATSLEEFSNS NFDKNFSDDY CEKACNSFDE
EIISRKTHPR FHMKPVHTLA LMLILVAALC ASLTMLISQS LTYQRVQNEK AGAFAIENDD
TSREKPSFNN VKDKNKNDDE EKSVSNESDE NSGSDVSDGD DVSKGNNGSK SNNKSNKGDS
NNKSDRSNEN TASHQSNTGR ININTATLDQ LQTLKGIGPK TAARIIAQRK RVGYFRSLED
LMQIKGIGPK TLNKFRGNVD VK
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