| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0936 |
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| Symbol | |
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| ID | 8709959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1076490 |
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| End bp | 1077641 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646483033 |
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| Product | tRNA methyltransferase complex GCD14 subunit |
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| Protein accession | YP_003374149 |
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| Protein GI | 283783395 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2519] tRNA(1-methyladenosine) methyltransferase and related methyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTTCAG GTAGTTCGCG TAGCAGAGTG TTACGAGTAG GTGAGAAGAT TCAGTTCACT
GATCGTAAAG GTAAGCGAAT TACTGCACAA CTTATTGCAG GCGGGGTTAC ACAAACTGAG
CATGGTCTTA TTTGTCACGA CGATGTGATT GGTCAAAGCG AAGGTGTTGT AATTACTACT
GTTAGTGCAA AGCGCGAATC TCAGCAAAAT AGCGAAAATC AAGAATCTAA AGACCTTTCA
AAATCTGGCA ATAAGCCTTG GAAAGCAGCT CGCGCTATTG GCGGATGGGA TTATGTAGTT
ATGCGACCGC GCATGGTTGA CTACGTGCTT TCTATGCCTA GGGGTGCGCA AATTATGTAT
CCAAAAGATA TTGCGCAAGT AATCGCTTTA GGAGATATTC GCTCCGGAAT GCGCGTTTTG
GAGTCGGGTG CTGGTTCTGG TGCTATGAGC TTAAGCCTTT TGGACGCAGT TGGGGAGTGC
GGAAAGCTTA CTACTATTGA GCTTCGCCCT GATTTTGCGC GTATTGCTGA ATCTAACGCA
ACTTTGTACT ACGGAAAGCG CCCAGAATGG TGGAATTTGC TTACTGGCGA TTTTGATTCT
GTTGCAAAAA CTTTAGATGC GCACAGCGTG GATCGCATTA TGCTAGACAT GCTTGATCCT
TGGAATCGCC TTGAACAAGC ACATCGCGTT ATTGTGCCTG GAGGCGTGCT TATTGCGTAC
GTTACGACCA CTACGCAAAT GTCTCGCATG GCTGAAGCTT TGCGAGAAAG TGGCATGTGG
ACTGAGCCAG AAATTCAAGA AACATTGGAG CGCACTTGGA AAGCTCAAGG TTTGGCTGTG
CGCCCGGATC ACGCGATGAT TGGTCACACT GGATTTTTGA TTGTTTCACG CGCAATGGCT
GAAGGTTTTA GTGCTTTGAA GAAGCGTGAA CACGGTACTA AAGATACTGT GAGCGATATT
GACGATATGA CAGCAGAAGA GCGCGCTGAA CAGTTGGAAG ACTTGTCTTT GCGCGATATT
TCGGATCGTA AATTGCGTAA AGTTTTACGT GATTTAGACG TGCAGCTTGC GCAATTGCCG
GAAGATTCGC AGTCGCAAGA TTTGCAAGAT TCGCAGTCTG CACAACAATC AGCGCATAAT
CAAGCTAAGT AG
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| Protein sequence | MRSGSSRSRV LRVGEKIQFT DRKGKRITAQ LIAGGVTQTE HGLICHDDVI GQSEGVVITT
VSAKRESQQN SENQESKDLS KSGNKPWKAA RAIGGWDYVV MRPRMVDYVL SMPRGAQIMY
PKDIAQVIAL GDIRSGMRVL ESGAGSGAMS LSLLDAVGEC GKLTTIELRP DFARIAESNA
TLYYGKRPEW WNLLTGDFDS VAKTLDAHSV DRIMLDMLDP WNRLEQAHRV IVPGGVLIAY
VTTTTQMSRM AEALRESGMW TEPEIQETLE RTWKAQGLAV RPDHAMIGHT GFLIVSRAMA
EGFSALKKRE HGTKDTVSDI DDMTAEERAE QLEDLSLRDI SDRKLRKVLR DLDVQLAQLP
EDSQSQDLQD SQSAQQSAHN QAK
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