| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0924 |
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| Symbol | |
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| ID | 8709854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1055313 |
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| End bp | 1056209 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646483022 |
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| Product | putative dihydroorotate dehydrogenase, electron transfer subunit |
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| Protein accession | YP_003374138 |
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| Protein GI | 283783384 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATG GCATGTTTAT TCCAACGCGA AAAGCCTCTG GAAACGCCAT AATTACGTTA
CGTGAAGACG CTTTTGATTC TTCCGGCTCA AGTTCTGCAG ACGAAAGCAA TAATGCAAAA
TATTCGCGCC TTTGGGGGCG TAGAGCTGTA GAAGTACTCA ATAATGAGAA GCTAGACGAA
GGCGTGTACC GTTTGACTTT GCGAGATTCT GAGATTGCTA AAAAAGCTGC TCCTGCGCAA
TTTGTGAACT TGTATTCCCC TGACCCGACT GCTATGCTTC CGCGTCCTTT TGGAGTTGCA
AGCGTAGAAG GCGATACTTT TACTTTGATT TTTGCTGTGA TTGGCAAAGG CACTGCTAAG
TTTGCTGAGC TTAAGCCAGG AGATAGCATT GACGCTCTTG GACCTTTGGG ACTTGGCTTT
AATATTTCCA AACCTGCACA TTATCTGTTG GTCAGTGGCG GCTTGGGTGT GCCACCTATT
TTGTGTGCTG CTCAAGCGCT TTCAAAGTGT GAAGATTCTA GCGTAACGGC AGTGCTTGGC
TACCGTAATA AGCGTTTTGC AGATGATTTA ACGAAAGAAT ATATTTCAGA CGTACACAGT
ATTACGAATG CTGAAGGAAC TGTTATTACG CTGCTAGACG AGCTTGAAGA AAGTCAGCAT
TTTAATTTTG GAGACGATTT ACCAACGGTG ATTTTGTCTT GCGGTCCTTT GCCTATGATG
AAAGCCGTAG CTCACTGGGC GCATGAAAGA AATATTGAAT GCCAACTCAG TTTGGAAGCG
CGTATGGGCT GCGGATACGG AACTTGCGTT GCTTGCGTTG TTGACACTTT GGAAGGCAGG
CTGAAAGTTT GCAACGACGG TCCTGTTTTT GATGCGAATC GTTTGGGTTG GGAGTAA
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| Protein sequence | MSDGMFIPTR KASGNAIITL REDAFDSSGS SSADESNNAK YSRLWGRRAV EVLNNEKLDE
GVYRLTLRDS EIAKKAAPAQ FVNLYSPDPT AMLPRPFGVA SVEGDTFTLI FAVIGKGTAK
FAELKPGDSI DALGPLGLGF NISKPAHYLL VSGGLGVPPI LCAAQALSKC EDSSVTAVLG
YRNKRFADDL TKEYISDVHS ITNAEGTVIT LLDELEESQH FNFGDDLPTV ILSCGPLPMM
KAVAHWAHER NIECQLSLEA RMGCGYGTCV ACVVDTLEGR LKVCNDGPVF DANRLGWE
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