Gene HMPREF0424_0806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHMPREF0424_0806 
Symbolfrr 
ID8709282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGardnerella vaginalis 409-05 
KingdomBacteria 
Replicon accessionNC_013721 
Strand- 
Start bp909952 
End bp910506 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content41% 
IMG OID646482907 
Productribosome recycling factor 
Protein accessionYP_003374024 
Protein GI283783270 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0233] Ribosome recycling factor 
TIGRFAM ID[TIGR00496] ribosome recycling factor 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCAA TAATTGATCA AGCCCGTGAA CAGATGAATA AGTCTGTTGA AGCTACTAAA 
GAGAATTTTA TGGGTATTCG CACCGGTCGT GCTAATCCTG CTTTGCTAAA CGGAATTATG 
GTTGATTATT ATGGTGCTCC AACTCCAATT AAAGCTGTTG CATCTATTGG TGTTCCAGAG 
CCTAGAACTC TTTCAGTTAC GCCTTTTGAC GCTTCTCAAG CGAATGCTGT TGAAAAGGCT 
ATTCGCGATT CTGATTTAGG TGTAAGCCCT AATCGTGATG GCAATGTTAT TCGTGTTACT 
ATGCCAGAGC TCACGGAAGA GCGTCGCAAG GAATACGTCA AGCTTGCTAA GAATAAAGCA 
GAAGAAGGCA AAGTTGCAGT TCGCAATATT CGTCGCAAAG CTAAGGAATC TATTGACAAG 
TCTGTTAAAG ATGGTGAACT TGGCGAAGAT GAAGGCGATC GTTTACAAAA AGAGCTTGAT 
AAAGTAACTA AGCAAGTTAC TGATTCTTTA GACGTTTTGC TTGAAGGTAA GCAAAAAGAA 
ATTATGGAAG TCTGA
 
Protein sequence
MSAIIDQARE QMNKSVEATK ENFMGIRTGR ANPALLNGIM VDYYGAPTPI KAVASIGVPE 
PRTLSVTPFD ASQANAVEKA IRDSDLGVSP NRDGNVIRVT MPELTEERRK EYVKLAKNKA 
EEGKVAVRNI RRKAKESIDK SVKDGELGED EGDRLQKELD KVTKQVTDSL DVLLEGKQKE 
IMEV