Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_0749 |
Symbol | |
ID | 8709421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | + |
Start bp | 846353 |
End bp | 847360 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 646482854 |
Product | type II DNA modification methyltransferase family protein |
Protein accession | YP_003373976 |
Protein GI | 283783222 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000000140331 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGTAAAT CAATTCTTGA TTATACTTTT GAGCAAAATG TTGATGAACA AACATTCTAT GAGAAATATC CTAAGGTTTT CTCCACTTTA TTGTTAGATC ATACAACAAA ACGCAATATT TGCTGGGCAA CGAATGATTA TAAAAATTAT GGTCATATTC ATCAAGCGCA TTCCGAAATA ACCATTGCTT CAATTACTGG TAAATATGCA GGATTGATTG CACCTAGAAC ATCAAAATCT CGTGAATTGC AAATATCTCG AACTAAAAAT AAGGCTGAGG TATTTACTCC ATCTTGGATT TGCAATGAAC AAAATAATTT GGTTGATGAG GCATGGTTTG GCAGATCTAA TGTTTTTAAT CGTACTAATG ACAAAAGTTG GATTTCTACC ACAGAAAAAA TTGAGTTTTC AGATAATCAC TCAAAAAATT GGATGGCGTA TGTAGATGAA CGTCGAATGG AAATAACATG TGGAGAGGCT CCATATTTAG TTAGCAGATA TGATGCAACA ACTGGCGAAA TAATTCCACT TAAGCAACGT ATCGGACTTT TGGATCGTAA GCTTAGAGTA GTTAAAGAGA ATACTAGTAA TGAAATAGAT TGGCTCAAGT GGTCTAAACG TGCATTTGAA TCTATATATG GTTTTGAATA TCAAGGAGAT AGTTTGCTTC TAGCAAGAGA AAACCTTCTT GCAACATATG TTGATTATAT GCGTGATTCG CTTAATAGAA AACCTACAGA ATCAGAGCTT TTAGGCATAG CAACTATTAT TTCTTGGAAC ATCTGGCAAA TGGATGGACT TACAGGGTAT CCGCCTTATT GTAGTGAGAT ACATGCAAAT ACTCAGCCAA CCTTATTTGA TTTTGAAGAA TTTGAAGAAT TTGAAGAGAA TGTAGATTCA CAAACTTCAA CATCCTGCCA AATAAAAGAT TGGCGCACTA ATAAAACCAA CACATTTAAT GACTTACTTT TACAGGAGAA AAACGATGGA ACAAGTAGAC AATCTTGA
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Protein sequence | MSKSILDYTF EQNVDEQTFY EKYPKVFSTL LLDHTTKRNI CWATNDYKNY GHIHQAHSEI TIASITGKYA GLIAPRTSKS RELQISRTKN KAEVFTPSWI CNEQNNLVDE AWFGRSNVFN RTNDKSWIST TEKIEFSDNH SKNWMAYVDE RRMEITCGEA PYLVSRYDAT TGEIIPLKQR IGLLDRKLRV VKENTSNEID WLKWSKRAFE SIYGFEYQGD SLLLARENLL ATYVDYMRDS LNRKPTESEL LGIATIISWN IWQMDGLTGY PPYCSEIHAN TQPTLFDFEE FEEFEENVDS QTSTSCQIKD WRTNKTNTFN DLLLQEKNDG TSRQS
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