| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0667 |
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| Symbol | |
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| ID | 8709194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 750474 |
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| End bp | 752180 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646482772 |
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| Product | Ppx/GppA phosphatase family protein |
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| Protein accession | YP_003373896 |
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| Protein GI | 283783142 |
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| COG category | [F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0248] Exopolyphosphatase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAACA GCCAAGAAAG TTCAGATAAA ATGCAGAACA GTAATAAGAA ATATATTCCA
GAAGAAGCTG TGAAACGTTT ATTTACTACA CCTGCAAGTG ATGCTGAGCG TACAATTGTT
GAAAAGCAAC TTGGAAGATT CCCTAGAGGA ATGGTAGCTG TTGGTGCGCG TTGCGTTTGT
GGTAGACCTC TTGCTGTTAT TACTAGACCA TGCTTAGAAG ATGGCACACC ATTCCCAACT
ACATGCTACC TTACCAGTCC TGAAGCTGTA AAAGCGGTGT CTCGCGTAGA AGCAGACGGT
ATTATGCGAG AATATAACGA GCTATTACAA TCGGACGAAG ATCTGAAGAA ACAATATGAG
CGTGCGCATA AGTATTATTT GGAATTCCGT CATGAATTAG CTGTGTCTTT GGGGGATAGT
GAAGAGCATA TTAGTCAGAT GAGCGCTGGT GGAATGCCAG TTCGTGTTAA ATGCTTGCAT
GCTTTGCTCG CGCAAACATT GGTAATGGGC AAAGGTGTAA ATCCGATTGG TGACATGGTA
CTAGAGCGCA TTAAAGATGA GTTTGATCCT AACGTGTGCC GTTGTACTAC TCCGTGGAGC
GATGATGCAT ATGCTACTGA AACGGAAGTT GTTGTGGAAG ACGAAACGAT TGCAAAAGAT
AAAACTGCAG AGGGCGAAGC TGTGAAAAGC GACACGACTA CTTGTGCAGA AAAAACAGTA
CAGGTTGCCG CAATTGACTG TGGTACGAAT TCTATTCGAC TAAAAATTGC GCAAGTTTCT
GAGCATGGAA TGAAAGATAT TGTACCTCGT ATGCTTCGCG TTGTTAGACT AGGTCAGGGA
ATTGACGAAA CTCATCGTTT CGCAGATGAC GCTTTGGAGC GAGTGAGGGA TGCTGCGCAC
GAATTTGCGC AAGTTTTGAA AGAACATCCA GTTGATGCGA TTCGTTTTGT GGCAACTTCA
GCTACACGAG ATGCTGAAAA TCGTGAGATT TTTGAACAAA TGATGATTGA TGAGCTTGGT
GTTCGTCCTG AAGTTATTAG TGGTACTGAA GAAGCAGCTC TTAGCTTCCT TGGTGCAACA
AGCGTTGTGT CTCGCGATGA GTTGCAGCCA CCGTATCTCG TAGTTGATTT AGGTGGAGGT
TCTACTGAGT TAGTGCTTGG AGGGGATGGG GACTGCTTGC CGGCGCACAA GGTTTCTGCA
GCATACTCCA TGAATGTTGG TTCTGTTAGA ATGACTGAAA GGCATTTGCA TACTGATCCT
CCTACGGAAG AGGAAATTCA AGCTGCGATT GAAGATATTG ACAAGCATAT TGATGATGCT
TTCAAAGTTG TCCCTGCAGG GCGAGCTCGT ACTATTATTG GCGTTTCTGG AACTGTGACA
ACTATGGCTG CTTTGACTAT GGGATTGCAG CATTATGATC ATACTGCTGT CGATGGTGTG
CATATTGGAT TAGAGCAGGC TTATGCTGTT AATAATCGCT TTTTGCGTAT GCCTAGGGAC
TGCAGGCGCA CGTATGCGAC GATTCACCCA GGGCGTGTGG ATGTTGTCGG CGGTGGAGCA
GTGATTTGGA GCCGTGTGTT GGAGAGATTA GCAAAAGCTG CGTATGAGGA TCACGGTGGG
GTTTTGGATA CGTTTGTTGC AAGTGAGCAT GGTTTGCTTG ACGGAATTAC GCTTGATTTG
GGAAGAAAGT TACTCGCCAC ACGCTGA
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| Protein sequence | MANSQESSDK MQNSNKKYIP EEAVKRLFTT PASDAERTIV EKQLGRFPRG MVAVGARCVC
GRPLAVITRP CLEDGTPFPT TCYLTSPEAV KAVSRVEADG IMREYNELLQ SDEDLKKQYE
RAHKYYLEFR HELAVSLGDS EEHISQMSAG GMPVRVKCLH ALLAQTLVMG KGVNPIGDMV
LERIKDEFDP NVCRCTTPWS DDAYATETEV VVEDETIAKD KTAEGEAVKS DTTTCAEKTV
QVAAIDCGTN SIRLKIAQVS EHGMKDIVPR MLRVVRLGQG IDETHRFADD ALERVRDAAH
EFAQVLKEHP VDAIRFVATS ATRDAENREI FEQMMIDELG VRPEVISGTE EAALSFLGAT
SVVSRDELQP PYLVVDLGGG STELVLGGDG DCLPAHKVSA AYSMNVGSVR MTERHLHTDP
PTEEEIQAAI EDIDKHIDDA FKVVPAGRAR TIIGVSGTVT TMAALTMGLQ HYDHTAVDGV
HIGLEQAYAV NNRFLRMPRD CRRTYATIHP GRVDVVGGGA VIWSRVLERL AKAAYEDHGG
VLDTFVASEH GLLDGITLDL GRKLLATR
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