| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0644 |
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| Symbol | |
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| ID | 8708857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 720938 |
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| End bp | 721723 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 646482750 |
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| Product | response regulator receiver domain protein |
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| Protein accession | YP_003373874 |
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| Protein GI | 283783120 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.520039 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAATA TGGAAAACAA TGAAGTAATT CGCGTTGCAA TAGCAGACGA TCAGGAGCTT
GTGCGAGCAG GATTTGCGAT GGTAATAAAT TCGCAGCAAG ATATGCACGT TGTATCTCAG
ACTTCTAATG GATCACAAAT TGTGGAGCTT TCTAAAAGCC AAAATCCAGA CATTATTCTT
ATGGACGTTC GCATGCCTGT AATGGACGGA TTGGAAGCAA CTCGCAAAAT TCTGCAGCAA
AAAACTAACG AAAATACTAA AATTATTATT CTAACAACTT TTGATTTAGA CGAATATGTT
ATGGCTGCAA TTCATGCTGG TGCTTCCGGG TTCCTTTTGA AAGATACTGA ACCTGAAACT
TTGCTTAATT CAATACGAAC AGTGTATCAA GGAAACGCAA TTATTGCTCC GACTGCTACG
AAGCGTTTGA TTGAAAATAT GATTCAGCAA GGCAAAGTAG CAACAAATAC TACAGAAAAC
AGTGCTGCGA ATTACACTGC GAATTACGCT GCACAAGAAA GTTACGATGT ACAAGCAAAT
CCGGCTGCGC AAGCAACACA AAGCTGCGCG TACACAAATT CAGCTATTAC AGAACTTACT
GATAGAGAAC GCGAAGTTCT TGTTGAAATT GCTCACGGAC TTTCAAATCA GGAAATTGCT
GACAAACTAT TTATTAGTTT GCCAACAGTT AAAACTCATG TTGCGCATAT TTTAGGAAAA
ATCGGTGCTC GAGACCGCGT GCAGGCTGTA GTTTTCGCTT ATGAAAATGG CTTAGTTAAG
CCGTAA
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| Protein sequence | MENMENNEVI RVAIADDQEL VRAGFAMVIN SQQDMHVVSQ TSNGSQIVEL SKSQNPDIIL
MDVRMPVMDG LEATRKILQQ KTNENTKIII LTTFDLDEYV MAAIHAGASG FLLKDTEPET
LLNSIRTVYQ GNAIIAPTAT KRLIENMIQQ GKVATNTTEN SAANYTANYA AQESYDVQAN
PAAQATQSCA YTNSAITELT DREREVLVEI AHGLSNQEIA DKLFISLPTV KTHVAHILGK
IGARDRVQAV VFAYENGLVK P
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