Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_0587 |
Symbol | |
ID | 8708805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | - |
Start bp | 639129 |
End bp | 640952 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 646482696 |
Product | FtsK/SpoIIIE family protein |
Protein accession | YP_003373823 |
Protein GI | 283783069 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1674] DNA segregation ATPase FtsK/SpoIIIE and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.58399 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATGGA TGCAAGATAA TTGGATGATG CTAACCATGA TTATTCCAAG CATTATGATG TACATAGCAA GTCTTATTCC ACAAATTTTT CAATACATAT CTGAGAAAAA TTCTGTTCAA AATGTTCAAC AAAATCAGCA AATTCAATTA TTAAACACTA CGCAATCGTC AAATAACGTA ACTTATAATC AACAAACTGT AGAAAGTTTG CCAGATACTA TTACACCAGT AAGTTTAGAA ACATTACTTA TGAGAAGAAA TGCAATTTCT AATACGCAAC ATCACTGGAA AGAAGTATTG CAAACATGGT TAAAAAATGC AGGAACATAC GACATAAAAA ACAAATCCAA TAGTATGAAG GAAAATCTAA ATACAAATAT TTATAACTAC TTGCCTAATT CAAAAACTAA ACACCTTATA GCTCCACTTG GAATAAGTAA TAATGGCTAC TGCTATTTAG ATTTAATTAA CAATGGGCCA CATGCTTTAG TTGCTGGAAC AACTGGTTCT GGTAAATCAG TACTTCTTAC GACTTGGTGT TTAGCTTTGG CTTTTCAATA CGGTCCGCAG CAGCTACGGT TTGTTTTTAT GGATTTTAAA GGAGGAGCAA CTTTTGACAT ACTATCTAAA CTCCCACATA CTATGGGAAA CGTAGGAGAT CTAAATCTTA AACACGCAAT ACGCGCTCTA AAAGGTCTCG AACTAGAACT AAATAGACGA GAAAGACTAG TAGCTCATCA TGGATGTAAT AATATTGCAC AAGTAACCCC AGCTGAACCT TCATTGCTTA TTGTTATTGA CGAATTTCAT GCTCTAAAAG ATCAACTTCC CGACTACATG CCTCGTCTTA TACGAATTGC ATCAGTAGGC AGATCTTTGG GAATGCATAT TATTGCTGGA ACTCAAAATC CACTCGCACA AGTAAGCGCA GATATGAAAG CTAATATTTC TATTAATATT TGCTTGAGAG TTAGAGACGG AATGCAATCG CAAGAATTAT TAGGAACAGC GCATGCAGCT AGAATAAGCC CAAATACGCC AGGAGCCGCA TATTACAATA TTGGAGAAGG AGTAGAAGCT TTGCGATGTG CTCAAAGCAG CAATCCTGCA CATTTAGTAC GAGCAATACA GTTAGCTGGT AGATTCTGCC ATCATGATCA TTCTCCAGAA TTATTTAGCA AACCATTGCC GTCGATTCTT TCAGCAAAAC AACTTGCAGA GTATTCAAAT AATTACAAAT ACAAAAATTC GGAGCAAAAA ATATCTCAAA GTTTACGTAC TCAAGAATTT TATACGAAGC ATATTATTAT TGGGTTGCAA GACGATACCA TACACTTATA TCCTGCTCTA TTACCAATTC ACCTTGGAAA TATAGCTGTT ATTGGTAGTA GGAAACAAGG CAAAACAACA ATATTAAAAA TAATTTCTAA AACTTTAAAC CTGCCAATAT ATTCAGGAAA ATCACTATAT GAACAAAACA TTAATAACAT TTACAACGAA AATACGCCAA TCATTATTGA CGATGCAGAT GAATTGCTTG ATCCGCTAAA TACTAAACAA ACTGCTATTG CTTTTCAAAA AAGATTAAAT AGTAAACAAT GCCCAGTTAT TATGAGCACT AGCACTTCTC GCTACTTACG TTTACCTGAG CAAGCACCAG TAAGGATAAT ATTTCCAACA GGAGATGTGG GCACAGATAC AATGCTTGGA ATACCTTCTG CTTTATCTAA AAGTTTTGAT ATTGAAGACT ATCAACTTCC AGGACGATGC GTTTTAATCA CTCCAGGATC AGCAAGTTTA ACTCAAATAG TGCACCTAGA ATAA
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Protein sequence | MAWMQDNWMM LTMIIPSIMM YIASLIPQIF QYISEKNSVQ NVQQNQQIQL LNTTQSSNNV TYNQQTVESL PDTITPVSLE TLLMRRNAIS NTQHHWKEVL QTWLKNAGTY DIKNKSNSMK ENLNTNIYNY LPNSKTKHLI APLGISNNGY CYLDLINNGP HALVAGTTGS GKSVLLTTWC LALAFQYGPQ QLRFVFMDFK GGATFDILSK LPHTMGNVGD LNLKHAIRAL KGLELELNRR ERLVAHHGCN NIAQVTPAEP SLLIVIDEFH ALKDQLPDYM PRLIRIASVG RSLGMHIIAG TQNPLAQVSA DMKANISINI CLRVRDGMQS QELLGTAHAA RISPNTPGAA YYNIGEGVEA LRCAQSSNPA HLVRAIQLAG RFCHHDHSPE LFSKPLPSIL SAKQLAEYSN NYKYKNSEQK ISQSLRTQEF YTKHIIIGLQ DDTIHLYPAL LPIHLGNIAV IGSRKQGKTT ILKIISKTLN LPIYSGKSLY EQNINNIYNE NTPIIIDDAD ELLDPLNTKQ TAIAFQKRLN SKQCPVIMST STSRYLRLPE QAPVRIIFPT GDVGTDTMLG IPSALSKSFD IEDYQLPGRC VLITPGSASL TQIVHLE
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