| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0586 |
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| Symbol | whiB |
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| ID | 8709849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 638850 |
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| End bp | 639122 |
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| Gene Length | 273 bp |
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| Protein Length | 90 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646482695 |
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| Product | transcription factor WhiB |
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| Protein accession | YP_003373822 |
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| Protein GI | 283783068 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.470912 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAACT CGTTTGATTG GCGCACAACA GCAGCATGTA GTGACAAAGA TCCTGAACTG
TTCTTTCCTC TTGGAAGTGC TGGTACAGCA GTTCAACAGC TTGAAGAAGC AAAAGCAGTA
TGTCGCTCAT GTGATGTTGC AACAGAGTGT TTAAAATGCG CATTAGAAAC TAACCAAGAT
TACGGTGTGT GGGGAGGATT AAGCGAGGAT GAGCGTAGAA CTCTAAAGCG TCGAGCAATG
CGCGCACGTA AAAATCAAGA TGCGTCACTA TAG
|
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| Protein sequence | MSNSFDWRTT AACSDKDPEL FFPLGSAGTA VQQLEEAKAV CRSCDVATEC LKCALETNQD
YGVWGGLSED ERRTLKRRAM RARKNQDASL
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