| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0584 |
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| Symbol | |
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| ID | 8710016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 636091 |
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| End bp | 637053 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646482693 |
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| Product | L-lactate dehydrogenase |
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| Protein accession | YP_003373820 |
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| Protein GI | 283783066 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01771] L-lactate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.543838 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGAGTT CGCAGGTTAA GCCAACTAAG CTTGCAATTA TTGGTGCCGG CGCGGTCGGA
TCTACTCTCG CTTTCGCTGC TGCTCAGCGT GGTGTTGCGC GTGAGATTGT GCTTGAAGAT
ATTGCTAAGG AACGTGTTGA AGCTGAAGTT TTGGATATGC AGCATGGTTC TAGCTTCTAT
CCTGCAGTTT CTATTGCCGG TTCTGACGAT GTGGAAATTT GCCGTGATGC TGACATGGTC
GTGATTACTG CTGGTGCTCG CCAGAAGCCA GGTCAGACTC GTTTGGAGCT TGCAGGTGCC
ACTATCAACA TCATGAAGTC AATCATTCCG AACGTTGTGA AGGTTGCTCC TAACGCAATT
TACATGTTGA TTACTAATCC TGTTGATGTT GTTACGCACG TTTCTATGAA GCTTTCTGGT
CTTCCAGCAA ACCAAATGTT TGGTTCTGGT ACCAACCTTG ATTCCGCTCG TCTTCGTTTC
TTGATTGCTC AGCACACTGG CGTTAATGTT AAGAACGTTC ACGCATACAT TGCTGGCGAA
CACGGTGACT CTGAAGTTCC ACTGTGGGCT TCTGCAACCA TTGGTGGTGT TCCAATGTGC
GATTGGAACG CTCTTCCAGG TCATGAGCCA CTTGATGCTG CTAAGCGCGA AGAAATCCAT
CAGGAAGTTG TTAACGCTGC TTACAAGATT ATCAACGGTA AGGGTGCAAC AAACTATGCT
ATTGCTATGT CTGGTGTAGA TATTGTTGAG GCTGTTCTTC GCGATACTAA CCGCATTCTT
CCAGTGTCTT CTTTGCTCGA TGACTTCCAC GGCATTTCTG ATGTGTGCAT GTCTGTGCCA
ACATTGCTTA ATCGCAATGG TGTAAACTCT CGTCTAAACA CTCCAGTTTC TGATCGTGAG
TTGGCTGCTT TGAAGCGTTC TGCTGAAACT TTGCGCGAAA CTGCTGCTAA GTTTGGTTTC
TAG
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| Protein sequence | MVSSQVKPTK LAIIGAGAVG STLAFAAAQR GVAREIVLED IAKERVEAEV LDMQHGSSFY
PAVSIAGSDD VEICRDADMV VITAGARQKP GQTRLELAGA TINIMKSIIP NVVKVAPNAI
YMLITNPVDV VTHVSMKLSG LPANQMFGSG TNLDSARLRF LIAQHTGVNV KNVHAYIAGE
HGDSEVPLWA SATIGGVPMC DWNALPGHEP LDAAKREEIH QEVVNAAYKI INGKGATNYA
IAMSGVDIVE AVLRDTNRIL PVSSLLDDFH GISDVCMSVP TLLNRNGVNS RLNTPVSDRE
LAALKRSAET LRETAAKFGF
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