| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0572 |
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| Symbol | lexA |
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| ID | 8709151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 619055 |
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| End bp | 619789 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 646482681 |
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| Product | repressor LexA |
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| Protein accession | YP_003373808 |
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| Protein GI | 283783054 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0263209 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAACG ATGGCACAAA TAACGATAAC AATGGCATTA ATGCTAGCGA TATTAGCGCA
ATGTCACTTA CTGACCGCCA ACGCAATATT ATCAATGCCA TCCAAAACAA TATAAAAATT
CATGGATTCC CTCCTTCTTT CCGCGAAATC GGAGAAGCAG TTGGACTTAG AAGCCCATCT
TCTGTGAAAC ATCAATTGCG AACACTTGAA GATAAAGGGA TTTTGCGAAT TAATGCAAAT
AAAGGTCGCG CTATTGAAAT TCTTGATAAT TCAATTGTTG AAAAGAATTC AAATAACAAA
ATTAATAAAA ATTCTTCAAG AGTTGCCAAT ATTAGCGCAT ACGAATCTGA TTCTGTTATA
AATTCTAGAG ATGTTCCTCT AGTGGGAAGA ATCGCAGCAG GAGCTCCAAT AACAGCAGAA
CAGCATATTG AAGATGTAAT GCGATTGCCA GAACGTCTTA CAGGTACAGG AAATCTTTTT
ATGCTTGAAG TACACGGCGA TTCGATGATT GACGCCGCTA TTTGCGATGG CGATTATGTA
GTAGTTAGAG AGCAGCATGA GGCTGTAAAT GGAGACATTG TTGCAGCACT GTTAGATAAC
GAAGCAACTG TTAAAACTTT CAGAAATGAC CACGGTCACG TATGGCTTAT TCCACATAAT
CCGGCTTACT CTCCTATTGA CGGATCACAC GCAACTATTA TGGGAAAAGT TGTTACAGTT
TTGCGAAAAA TATAA
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| Protein sequence | MNNDGTNNDN NGINASDISA MSLTDRQRNI INAIQNNIKI HGFPPSFREI GEAVGLRSPS
SVKHQLRTLE DKGILRINAN KGRAIEILDN SIVEKNSNNK INKNSSRVAN ISAYESDSVI
NSRDVPLVGR IAAGAPITAE QHIEDVMRLP ERLTGTGNLF MLEVHGDSMI DAAICDGDYV
VVREQHEAVN GDIVAALLDN EATVKTFRND HGHVWLIPHN PAYSPIDGSH ATIMGKVVTV
LRKI
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