Gene HMPREF0424_0545 details

Gene Information

• Locus tag: HMPREF0424_0545
• ID: 8709365
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Gardnerella vaginalis 409-05
• Kingdom: Bacteria
• Replicon accession: NC_013721
• Strand: +
• Start bp: 584190
• End bp: 590279
• Gene Length: 6090 bp
• Protein Length: 2029 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 646482656
• Product: GA module
• Protein accession: YP_003373783
• Protein GI: 283783029
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG1196] Chromosome segregation ATPases

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 1
• Fosmid unclonability p-value: 0.00000025562
• Fosmid Hitchhiker: No
• Fosmid clonability: decreased coverage

Sequence

Gene sequence

ATGGTTAAGA AAACACAAGC TGCTAAAAAT GCTTTACATG TGTCTAAGAA TTACGCGTAT 
TTGAAGCCGA GTACACTTCG TTCAATGGCG AAAGAGATAA GTGGAACTCG TTTAGAAGCA 
TGTAAGTCGT ATGCGGTTTC ACGTTTACCG AAAATTGCTG TGACTGCAAC ATTGGCAAGC 
TTGCTTGCTT GTGGTGCTGG TTTGCCAACT CATCAAGCTT GGGCTAATGG TTTTAATCTT 
CCTGATGGTA GCTATAGGTA TGCGAATCGC GATTCTTCTA CAAAGGCGCA GAGGTATGTG 
GATATTAAAC TAGTGCCATG CGATGAAAAA CAAAACGATA ATAAGGAAAC AGCAGACAGA 
AAAACTTACG GACAATATTA TAAGGTTGTG TACCAGTTTA ATTCTCAGGG TGAATGGTGG 
GGTGGTCGAC CATTCTGGTG GGCGAGTGTG CCTAAGGGTG TTGACATTGT AGATAATAAA 
ATTACTTTGT ACAAAGATGA ACAGTTGACT GGTGATTCGT CTTCTCAACA AACAGGTGCA 
ACATATACAA AGGAGTCTTG GAATCAGTCT GCCAGCCGTT TCTGGTTTGA TAATAATAAA 
GAGCAAGGCA CTGAATTTAA GAATAACTGG GAAAGAATGA CCGGTGAAGC CGGTGGTTAT 
GACGAATCTG GTAATACTCT CGGTACTTCT AGGGAATATA AGGACGCTAC TAGTGCCTTG 
ATTATTAACT GGGAGAGTAG AGGCAATAGA AAGTCTAAGA TTAGCTTCGT TATTAAACTG 
AATGATAAAA CGAAGCCTTT GAAATTTGCT GCAGGTGTGT ACCAGGTGAT GGGCAACTGG 
CATTACACTG CTGGTAAGGT TGCGCTTGCG CCGACGTTGC CAAAATACTC ACAAGAATTG 
GAACTTACTT ATCCTACAGA TAAAGTAGAA GTTGATTCTT CGACATATGG AAATAATCTT 
TCAGAAGATG AGAAAAAGGC TGTTCTTACA AAGCTGTGGA ATGCTAATAA GAGTAATACC 
GATGTGCTGA AAAAGCTTAA AGGTATGGAA CAGACTCAAA CTGAAGAGGC TTTCAAAAAG 
GCTGTAAAAG TCAATAACGA TGGTAGCGCA ACGGTAACAT ACAAGGATAA CTCTACGGAT 
ACTATTTCTA AGGAGAATCT GACTAAGCGT TATATTCCTT TTGCTGATAA GGTGAAAATT 
AACTATCCTA CCAATTTAAC TCCTGTTAAA AATATTTCTC AATTAAGCAA GGAAGAGAAA 
CAAGCTGTAA AGAATGCTAT TTTAGCAGCT AATACTGGTA AGCATATTAA AGATTTGACT 
GTTGATGCTA GTGGCAATGC GACTATTACT TTCACTGATA AGATTGGCGC TCCTTCAACT 
AAAAAGCTTG AAGGCAAGTA TCTTGTAAAG AAGCAGCGTT CACTTGCGGA TAAGTTTACG 
CCGTACTATC CAGTGCCAAT GGCAGTTGGA AATCCACAAG GGTTGACTGT GAATGAGCAG 
ACGGAACTTG TGAAGAAAGT TTATGAAGCA AATAAAAATA AATCTGACTT CATAGATGCA 
ATTGGTAAGC CTAACAATCT AGAAGAAGCT AAGAAATCTA TTACAGTAGA TAATAAAGGC 
AACGTAACTA TCACTTATAA AGATAATACT GCTGATTTTC CATCTACTGA TAAGCTCGAT 
GGCAACAAGC TGGTGTATCA AGCGAAGAAG CTTAATGAGA CCACTTACAT TACGCTTCCA 
GCTCGTACAG CTGTAAAAGA TGCTAAGGCA ATTCAAACCA ATGAACAGTC AACTATTAGG 
CAAGCCATCT TAACAGCCAA TAGTGGTCTT CAAAGCAAAC TAAAAGGCAG TAATGAAAAT 
ACGGCGATTA CGTTTGATGA TGCTAAGCAT ACTATGACTG TTAAGTTTAA TGATGATTCA 
ACTTCTACCT TCGACTATTC TGAGTTGGTA TACACCAAGG GGAATCCAGA AAAGCCAAAA 
ACTGAAACAA AAAATAGTAA TGGGTACAAG TACAACATTA CTAAGATTGT CATTAAGGAT 
AAAAATAAAC CAGTGACTGC TGATTGGAAT AGTTTTGCCC GACAGTTTAT TAGAGATAAC 
TGGAAGTCTA AGGATGTCAG TAATCCAATA ACGGATCAAT TCATTAATAG TAATCCTGAT 
CTTATGGGTA TGTTCCATTC TTCTGATCCA AAATCTTCTG GAGGAATGAA ACTCTATAAT 
TTCTCAAATA AATGGGAAAA TAACAATTCT AATTTAACTT TATCTGATGG GTCTTGGAAT 
AACTATAATA TTGTCTCTAT TTATGAAGGT GGTTCTGGGT TTGAAATAAA AAAGAATGAT 
AATTATGGTC CAAAAACAAT AATCACTCTT TCTGCAGATG ATTGTTTTGT ATCTAATGCT 
GCCGCTCCTA ATCCTGAAGC GCTTAAGAAG GAAGCTGAGG ATCTTATTGA CAAGATTCTT 
CAGAAGCATG GCTTGAGTAA GGATGAGATT GATAAGTTCA AGAAAGATCA TCAGAACGAT 
ATTAACAAGA TCACTAAGCC AGAAGATGTA GACAAGATTA TTAAGTCTGC TGATGAGCAT 
GGTAAAGATG AGAAGAAAAA GAAAGATGCT CAGAAGCAGA TTGAGAATGC TACTAGTGGC 
TTAGCTGAGA AAACTAAGAA AGAGCTTGAA AAGAAGATTG GTAATGAGAC TGATCCTGAA 
AAGATTCGTG AGAAGATAAA CGAGTTCCAA AAGGATCAGG ATCAAAAGAA GCAAAAGGAA 
GCTGATCAAA AGCAGCAACA AGCTGATCAG CAGGCTGAGC AGGAAAAGCA ACAGCAGCAG 
CAGAAAGATG ATGCGAAGGT TGATGGCGAG GTAACGAAGC AGAATCAACA GGAGCAGCAA 
GACACAGGCA AGGCTGAAGA AGCTAAGAAG AAAGCTGAGC TTGAGAAGCA AAAACAGGCT 
GCTATTAATG AAATTAACGG GAATGATAAA CTCAAGCCTG ATTGGAAAGA GCAGTTTATT 
CAGCAAGTTA ATGAAGCTCA GGATACTGAT GGTGTAAATA AAGCCAAAGA TGCTGCTAAA 
CTAAAGGGCA CTCAGAATCA GACTGCTGCT GATAACAGTA ATAATGATGG TCTTAATAAC 
GCTAAGACTG ATGCTAAGAA GAAGATTGGT GAGTTGACTA ATCTCAGCGA ACAAGATAAG 
CAGAAGTATC AGGGTGACAT TGATAACGCT AAAGATCTTG ATAAAGTTGC AGAGATTCTC 
AACAATGCTG AGTTTGAGGA TGCTAAAGCT GATGCTAAGA AGAAGATTGC TGATCTGAAG 
CAGAAAGGTG ATATTACTGA GCAAGAAGCC AATGGTTTAA CCGGTCGCAT TGAGAATGCT 
AAGGATTTGC GAGAAGTTGA GGGTATTCTT GAGGAAGCTG AGCTAAAGAA AGCTAAGAAG 
GATGCTGAAT CTGAAGTAGA TAAGCTCACC AATCTTAACA AAGCTCAGAA GGATGCGCTT 
AAAGCAGAGA TTGATGATAT TGAAACTGAC CCGACCAATG AGAATATGAA GACTATTGAG 
AAGGTCAAGA CCGCTATCAC TGCTGTTGTT ACTAAGGCTA AAGAGCTTGA TGGCAAGATG 
AAGTCGCTCA AGGATCTTGT GACTCTTGTT AATGGTCAGA AGTCTACTCT TACAGCAAAG 
CCTGATTATA AGGATAATAA GAAGACTGCT TTTGACAGTG CGTTAAAGGC TGCGGAAGAT 
CTTGTTAAGA CTGATTCGGC TGAGAACAAG ACTGCTGATG AAGTTGACAA TATTAAGAAC 
GCATTAGAAA AAGCTGTTAA GGATCTCGGT GGCAAAACTG TTGATAAGTC TGCGCTGCAA 
GAACTTATTA ACGGTGACAC TGGCTTCAAG AAGACTATTG TTTACATTAA TGCAGATAAG 
AGTAAGCAAA CTACTTATGA TAAAGCTATT ACTGATGGTA AGTCAGTGCT TACTGATGCT 
AATGCAACTG TTGAGCGAGT GACTCAAGCT GTTAATGCTA TCAATTCTGC TAAGGCTGCT 
CTTGATGGCA AAGTTAATAC AACTGAACTT GAGCAGAAAG TTTCTGAGGC TAAGAAGCTG 
AAGAAGTCAA CTAACCCTCA ATCTGCTGGC GATGCTAAGT ATGAGAATGC TTCTGAAGCA 
AAGAAGTCTG CGTTTGATAC AGCTTTGCAA CAGGCTGAGT CCGCTCTTAC TGAAGCTAAG 
AGCGATCAGT CTCAGAAGTC TCCTGAGCAG AAGCAGCAAG CTGTTAATGA TGCGTTGACT 
GCGCTTACTA AGGCTGTTCA AAATCTTGAC GGTAATGACG TGAGTAAGTT GCAGACTGCT 
ATCGCCAATG CAAAAGCTAA GCAGCAAGAA GTTGTTTACA AGAATGGTAC TGCTGTGAAG 
AAAAAGGCTC TTGATGATGC TTTGAAGACT GCCGAAGATC TTGTTAAGAC TCCTCACGGT 
CACACTGATT CTGAAATCAG CACAGCTTTG AATAACTTGA ATACTGCAAT AAGCGGTCTT 
GATGGAATGG TTAATACAGC TGAGCTTCAG ACGGCTGTTG ATAATGCTAA GAAGTTGACC 
GGTGTTACTA CTCCTAAGTC TCAGGACGCA TATAAGTATG AGAATGCTTC TGAAGCAAAG 
AAGTCTGCGT TTGATAAGGC TTTGCAACAG GCTGAGTCTG CTATTACTGA AGCTAAGAAT 
GCTAAGTCTA CTAAGACTCC TGAGCAGAAG CAGCAAGCTG TTAATACTGC GTTGACTGCG 
CTTACTAAGG CTGTTAATGA ACTTGACGGT AACGACAAGT CTCAATTGGT AGCAAAGCTC 
GCAGAAGCAA AAGGTAAGAA GAATGATGCT TCTTATAAGA ATGCTTCTGC TGCTAAGCAA 
GCTGCTCTTG ACAATGCTAT AACCTCTGCA GAAGGTATTG TAAAGAAAGC TGGTGCAACA 
GCAGGTGAGA TTACTAACGC TATCACTGCT CTTACAAATG CTGTTACTGG TTTGGACGGT 
CACGATATCT CTACTTTGCA GACGGTTGTA ACTGCTGCCG AGTCGAAGAA GAAGACTATT 
GCTTACATGA ATGCTCCTGA TACTACGAAG ACTGCGTTTG ATCAGGCTTT GCAAGCTGCT 
CAAGATATCT TGAAGAATCC TCAGGGCAAG ACTGAGCAAG AAATCAACGA TGCTAAGACT 
AAGCTTGAAA CTGCTTCTAG TGCTCTTAAT GGAACTGTAG ATACGTCTAA GTTACAGGCT 
GAAGTTGACA AAGCTGATTC TTTGAAGAAG TCCGTACAGT ATACAAATGC TGTTCAGGAT 
AAGAAATCTG CGTATGATAC TGCTCTTGCT GCTGCTGAGT CTACTCTTGC TGATGCGAAG 
GATGCTCAAT CAACGAATAA TCCTGAGCAG AAGCAGACTG CTGTTAATGA TGCGCTACAG 
CAACTTCAAA CCGCAGCTGC TGCACTAAAT GGTGTTGATA TTGCTGATTT GCAAGCTGAG 
ATTGCTCTTG AGAATAGTGT GAAAGAATCT GTAAAGTACG TGTATGATAC TGCTGAAAAG 
CAGCAAGCAT ATAATAAGGC TTTGCAAGAT GCGAAGGAGC TTATATCTAA GCTAGCTGAT 
CCTGCTGGTC AGGGTGTGGA AGTTGCTGCT AAGTCTCAAG CAGATCGTCA AGCTCTTGTT 
AATACTGCGT TAAAGAGTCT TAAGAATGCT AAAGATGCTT TGAATGGTGT TAATAAGACG 
GTATTGCAAG CTGAAGTTGA TGATGATTCT CACTTTAGCA AGTCGTTTGC CTACTTGCTT 
GGTGAAGCTC CTGATTTGGA TGTGTATAAG AAGGCATTGG CTGAAGCTAA GAAGGTTGCT 
GCTGATCCTA ACGCAACTCA GGCTCAGGTT GATGCTGCGG CTAAGAAGCT TTCTGCTGCT 
CGTAAGGCTT TGGCGTCTGC TAAGGCTCAT GCGGCTGAGG TTCGTGCTTC TGTGCGCGCT 
CAGGTGTTGA AGAGTGGTAG TGTTGCTCAG CTTAGTAAGA CTGGTAGTGA CGTGTCTGTG 
TTTGGCTTGT TTGCTGCAAC TCTTAGTGCT GCTGGTGCTG CGCTTTTCTC AGCTAAGCGT 
CGTGGTACTT CTCGTCACAG TAATAAGTAG 

 

Protein sequence

MVKKTQAAKN ALHVSKNYAY LKPSTLRSMA KEISGTRLEA CKSYAVSRLP KIAVTATLAS 
LLACGAGLPT HQAWANGFNL PDGSYRYANR DSSTKAQRYV DIKLVPCDEK QNDNKETADR 
KTYGQYYKVV YQFNSQGEWW GGRPFWWASV PKGVDIVDNK ITLYKDEQLT GDSSSQQTGA 
TYTKESWNQS ASRFWFDNNK EQGTEFKNNW ERMTGEAGGY DESGNTLGTS REYKDATSAL 
IINWESRGNR KSKISFVIKL NDKTKPLKFA AGVYQVMGNW HYTAGKVALA PTLPKYSQEL 
ELTYPTDKVE VDSSTYGNNL SEDEKKAVLT KLWNANKSNT DVLKKLKGME QTQTEEAFKK 
AVKVNNDGSA TVTYKDNSTD TISKENLTKR YIPFADKVKI NYPTNLTPVK NISQLSKEEK 
QAVKNAILAA NTGKHIKDLT VDASGNATIT FTDKIGAPST KKLEGKYLVK KQRSLADKFT 
PYYPVPMAVG NPQGLTVNEQ TELVKKVYEA NKNKSDFIDA IGKPNNLEEA KKSITVDNKG 
NVTITYKDNT ADFPSTDKLD GNKLVYQAKK LNETTYITLP ARTAVKDAKA IQTNEQSTIR 
QAILTANSGL QSKLKGSNEN TAITFDDAKH TMTVKFNDDS TSTFDYSELV YTKGNPEKPK 
TETKNSNGYK YNITKIVIKD KNKPVTADWN SFARQFIRDN WKSKDVSNPI TDQFINSNPD 
LMGMFHSSDP KSSGGMKLYN FSNKWENNNS NLTLSDGSWN NYNIVSIYEG GSGFEIKKND 
NYGPKTIITL SADDCFVSNA AAPNPEALKK EAEDLIDKIL QKHGLSKDEI DKFKKDHQND 
INKITKPEDV DKIIKSADEH GKDEKKKKDA QKQIENATSG LAEKTKKELE KKIGNETDPE 
KIREKINEFQ KDQDQKKQKE ADQKQQQADQ QAEQEKQQQQ QKDDAKVDGE VTKQNQQEQQ 
DTGKAEEAKK KAELEKQKQA AINEINGNDK LKPDWKEQFI QQVNEAQDTD GVNKAKDAAK 
LKGTQNQTAA DNSNNDGLNN AKTDAKKKIG ELTNLSEQDK QKYQGDIDNA KDLDKVAEIL 
NNAEFEDAKA DAKKKIADLK QKGDITEQEA NGLTGRIENA KDLREVEGIL EEAELKKAKK 
DAESEVDKLT NLNKAQKDAL KAEIDDIETD PTNENMKTIE KVKTAITAVV TKAKELDGKM 
KSLKDLVTLV NGQKSTLTAK PDYKDNKKTA FDSALKAAED LVKTDSAENK TADEVDNIKN 
ALEKAVKDLG GKTVDKSALQ ELINGDTGFK KTIVYINADK SKQTTYDKAI TDGKSVLTDA 
NATVERVTQA VNAINSAKAA LDGKVNTTEL EQKVSEAKKL KKSTNPQSAG DAKYENASEA 
KKSAFDTALQ QAESALTEAK SDQSQKSPEQ KQQAVNDALT ALTKAVQNLD GNDVSKLQTA 
IANAKAKQQE VVYKNGTAVK KKALDDALKT AEDLVKTPHG HTDSEISTAL NNLNTAISGL 
DGMVNTAELQ TAVDNAKKLT GVTTPKSQDA YKYENASEAK KSAFDKALQQ AESAITEAKN 
AKSTKTPEQK QQAVNTALTA LTKAVNELDG NDKSQLVAKL AEAKGKKNDA SYKNASAAKQ 
AALDNAITSA EGIVKKAGAT AGEITNAITA LTNAVTGLDG HDISTLQTVV TAAESKKKTI 
AYMNAPDTTK TAFDQALQAA QDILKNPQGK TEQEINDAKT KLETASSALN GTVDTSKLQA 
EVDKADSLKK SVQYTNAVQD KKSAYDTALA AAESTLADAK DAQSTNNPEQ KQTAVNDALQ 
QLQTAAAALN GVDIADLQAE IALENSVKES VKYVYDTAEK QQAYNKALQD AKELISKLAD 
PAGQGVEVAA KSQADRQALV NTALKSLKNA KDALNGVNKT VLQAEVDDDS HFSKSFAYLL 
GEAPDLDVYK KALAEAKKVA ADPNATQAQV DAAAKKLSAA RKALASAKAH AAEVRASVRA 
QVLKSGSVAQ LSKTGSDVSV FGLFAATLSA AGAALFSAKR RGTSRHSNK