| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0490 |
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| Symbol | |
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| ID | 8709362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 536269 |
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| End bp | 537135 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646482604 |
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| Product | putative exodeoxyribonuclease III |
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| Protein accession | YP_003373731 |
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| Protein GI | 283782977 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0708] Exonuclease III |
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| TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.114528 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTACAA TTACGACTTC GAATTTAAAC GGTATTCGTG CAGCTGAGCG CAAAGGTATG
CTTAACTGGT CTGACGCGCA TACTCCAGAC GTGTGGTGTA TGCAAGAAGT GCGCGCTCCG
CAGGATGCAA TCGACCCAAT TATGACAAAA ATTGAAATGG GATATCGTAC GTCTGAAAAT
ATCGTAAATT CTATAAAAAA CGATAATTTT ACTTATACAA ATGAAGTTTG CCGTGTAAAA
GGTCGAGCTG GAGTAGCTCT AGTTACGTCT CTTCCTGTAG TTGAAAAACG CTACGGTTTG
CCTGGCTTAA ACGAGGATGT TGATTCTGGG CGATGGGTTG AAACTGACGT GCGTACCCCT
GAAGGGTATG AAATTACTAT TGCTTCTGTG TATGTTCATG CTGGCAATGT GGACGATCCG
CAGAAAATGC AACAAAAATT CCGCTTTTTA GACACAATGC TTATACGCTT GGGGGAGCTT
CGAAATATTG CAGCAAGTGG CGGAAATCAA GCGATTTTGT GCGGTGACTT TAATATTGCG
CATACTTCAC TTGATATTAA AAACGCTAAG GCTAATGAAA AAAGTGCAGG ATTCTTGCCA
GAGGAACGCG CTTATATTGA TCGCTGGATT AACGAATATG AATTTGTGGA CGTTATGCGC
ATGCTTGCAG GAGATATTCA AGGACCATAC ACTTGGTGGA GTCAGCGCGG TAAAGCTTTC
GACAATAACG TTGGCTGGAG ATTAGACTAC CAGTTCGCAA CTCCTGAAAT TGCGGAAAGC
GCTCGCGGAT TTGTGATCGA TCGTGCTGAA AGTTATGATG CGCGATGGTC TGATCACGCG
CCGTTAAGTA TAAAGTATGA CGTGTGA
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| Protein sequence | MITITTSNLN GIRAAERKGM LNWSDAHTPD VWCMQEVRAP QDAIDPIMTK IEMGYRTSEN
IVNSIKNDNF TYTNEVCRVK GRAGVALVTS LPVVEKRYGL PGLNEDVDSG RWVETDVRTP
EGYEITIASV YVHAGNVDDP QKMQQKFRFL DTMLIRLGEL RNIAASGGNQ AILCGDFNIA
HTSLDIKNAK ANEKSAGFLP EERAYIDRWI NEYEFVDVMR MLAGDIQGPY TWWSQRGKAF
DNNVGWRLDY QFATPEIAES ARGFVIDRAE SYDARWSDHA PLSIKYDV
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