Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_0462 |
Symbol | |
ID | 8710060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | - |
Start bp | 504699 |
End bp | 505601 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 646482577 |
Product | kinase, PfkB family |
Protein accession | YP_003373704 |
Protein GI | 283782950 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAAGC CAATTGTTCT TTCACTCGGC GAACTTTTAT GGGATTTGCT TCCACACGGA AAACGTGTTG GCGGAGCACC AGCAAATTTT GCATATCATG CACAGTGTCA CGGAGCGCAA AGTTGCATGA TTAGCGCTGT TGGTCAAGAC CAACTCGGCG ATGAGCTGAT TGACAAAGTG AACAAAGCTG GCATCGCTTC AATTATTCAA CGCAACGCTT GGCCAACAAG CACTGTAGAA GTAACACTAA AAAATGGAAT ACCAGAGTAC ACTATTCTGC GAAATATAGC ATGGGATCAT ATTCTTTACA CTCGAGAACT CATTGATTTA GTAGAACGAG CAGATGCAGT ATGCTTTGGC ACTCTAAGCT TACGTTCTCA AGAAACTCAC GACACAATTT TGCAATTGTT AAAGCATACT AAGCCTGGAG CAATGAAGTT CTTCGATATT AACATTAGAA GCGATCACTA CTCTAAGGAT CTTATTGACA CATTACTTCA AGAAGCAACA GTATTTAAGC TTAACGATTC GGAACTATTC TTATTACGCG ATATGTTCAA TATTCGCGAC ACTTCAGACG AGGAAGCTTG CAAGTGGTTC CAAGCTCGTT ACGGACTAGA TTATGTGATT CTTACAGGCG GCTCTACTTT TAGCACGATT ACTACTAGCA CTGGAGAAAG CTCAACTATC CCAACTCCAC ACGTTGAAGT TCTTGACACA GTTGGTGCTG GAGACTCGTT CTCAGGAACA TTTGCAGCGC ATATTCTTAA GGGAGAAAGC TTGCAAGAGG CGCATCGCGC AGCTGTTAAT ACTGCAGCAT TTGTGTGCAC TCAAGAAGGA GCATGGCCTA AGTATCCAAA ACAAATACCA GATTACTTGT CAATGGCAGA AAATAACAAA TAA
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Protein sequence | MTKPIVLSLG ELLWDLLPHG KRVGGAPANF AYHAQCHGAQ SCMISAVGQD QLGDELIDKV NKAGIASIIQ RNAWPTSTVE VTLKNGIPEY TILRNIAWDH ILYTRELIDL VERADAVCFG TLSLRSQETH DTILQLLKHT KPGAMKFFDI NIRSDHYSKD LIDTLLQEAT VFKLNDSELF LLRDMFNIRD TSDEEACKWF QARYGLDYVI LTGGSTFSTI TTSTGESSTI PTPHVEVLDT VGAGDSFSGT FAAHILKGES LQEAHRAAVN TAAFVCTQEG AWPKYPKQIP DYLSMAENNK
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