| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0432 |
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| Symbol | |
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| ID | 8710036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 471585 |
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| End bp | 472667 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 646482547 |
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| Product | Abi-like protein |
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| Protein accession | YP_003373677 |
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| Protein GI | 283782923 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4823] Abortive infection bacteriophage resistance protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000289684 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGTGATTT ATAAACCTTT TACTACTATC AGACAACAAA TAGAATTACT TAAGTCTAGA
GGAGTAGTGT TTCCTGATGA GATTAAAGCT ATGGAAATAC TTGAAAGAGA AGGTTACTAT
AGCGTTGTAA ATGGATATAA AAATCCATTT CTTGAGTCAA AAAATTCGAA TAAATATGTT
CAAGGAACAA AGTTTGAACA CATTTATTAT CTTTTTAAAT TTGATCGTGA ACTTCGCAGT
GTTATCTTTG CAGCTACAAC TAGAGCAGAA GCATTGTTAA GGTCATCATG TTCATATTGC
TTTAGCCAAA TGCACGGTAA TGAAGTTAAT GCTTACCTTA ATGAAACTAA CTATGAAGAT
CCAAAGGAAT CAGGTGGTTT AATTAAAGCA TTTAATCGAA TTATAGAAAA TAATAAGTCA
AATAATCAAA AATTAAATAT AGGAAAAGAG TACATACGAC ATTGTATCAA TAATCACGAT
GGGCAAGTTC CATTATGGGT TTTATCTAAT GATTTGACTT TCGGACAGAT GTTCTGGTTT
TACAAAGCGC AAACTAAATG CGTTAGAGGT TTGGTTGCTA AAAAATATAC TGAACTTTAT
AATTCTTCAC ACTGTTCTCA AAAAGATATT ACGTCAATAA AAATTGATTC TATTTATAGA
AGAATTAAAG AGTTCAGAAA TATTTGTGCG CATGATGAAC GTTTGTATTG TGCTAGACCG
CATAGTGATA ATGCAACAGT CTTTCAGCTT ATTAAAGATT TCGACATATT ATTAGAAACT
AGCTATTATC TAGAGTTTTT AGAGAAGATT GAAAAATTAC TTGTTGCGCT TTGCGATAAA
GTTCCAAATT GCTCTAAAAA TGTTATTGAA TGCATTGGAA TGTCTAGTAT TGATGAATTT
TATGATTGGA AAAATAAAAT TAAAGAAAAT ATTATCTTGA ATAGTAACTT GTCTGTTCCA
AACGAGGCAA CGCTTAAGGC TATGAATCAC GCTAATCAAA TTATGAATGG CAAAATTTCT
GACGATGGCA TTGCTTTTAG CAATGCTAAT GAAGCTAAGG CATTTTTGGA TAATATGTCA
TGA
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| Protein sequence | MVIYKPFTTI RQQIELLKSR GVVFPDEIKA MEILEREGYY SVVNGYKNPF LESKNSNKYV
QGTKFEHIYY LFKFDRELRS VIFAATTRAE ALLRSSCSYC FSQMHGNEVN AYLNETNYED
PKESGGLIKA FNRIIENNKS NNQKLNIGKE YIRHCINNHD GQVPLWVLSN DLTFGQMFWF
YKAQTKCVRG LVAKKYTELY NSSHCSQKDI TSIKIDSIYR RIKEFRNICA HDERLYCARP
HSDNATVFQL IKDFDILLET SYYLEFLEKI EKLLVALCDK VPNCSKNVIE CIGMSSIDEF
YDWKNKIKEN IILNSNLSVP NEATLKAMNH ANQIMNGKIS DDGIAFSNAN EAKAFLDNMS
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