| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0400 |
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| Symbol | |
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| ID | 8709106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 430089 |
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| End bp | 431114 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646482516 |
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| Product | universal stress family protein |
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| Protein accession | YP_003373649 |
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| Protein GI | 283782895 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCAG AAAAAGCTGT ATTGGTTGGA GTTGACGGCT CGCACGCGAG CTATAAAGCG
GTTTGGTGGG CTGCAAATTA CGCAAAGCAT GCTGGGTTGC AATTGCAAAT TGTTTGCGCT
TATTCGTTGC CGAGTTATGC TGCTGTTTCT TTTGATGCCA CTTACACTGC GATTGGTGAC
GATAATGCAG CTCATCACGA TGCACAAGAA ATTCTATCTA AAGCAAAAGC TGTTGCTCTT
GAGCAGGGTG TTGACGCGAC TACGCTAATT GTTACGGGCG ATCCTTCTTC GGTTTTCGTG
GAGCTTTCTC GTAACTATCA GCTTATTGTG ATTGGCAATC GCGGCAAAGG TGGCTTGGCA
GAGCGTTTGC TCGGCACAAC TAGTTCTTCG CTTCCAGCTT ATGCGTATTG CCCAATTGTG
GTTGTGCCTT ACACTGACGA TGACGGTCAG CGTATTCATT TGAATAATAC GATTACGCGT
GTGGCTGTTG GCTCTGACGA GTCGAAGTGG GGGCTTAAAG CTCTTGAAAT TGCGGCTGAT
TTGGCGGATA GCTGGCATGC TGAGCTTGAT GTTATTTCTG CAGTGCCAAG AGTGCAAGGT
GCTGAGGGCG ATACCGCTGT TATGGGCTCG TACATGGAGG ATCTTGAGGA GCGCGTGAAG
CCAATTTTGC AGCGTTTGCC GGATTTGCAA ATTCATCGAA CTGTTGTGCC TGGTTCTGCT
GTTGAAGCTT TGACTCAAGC TAGTTTGAAT CATGATCTTG TGGTTGTTGG TTCTCGCGGT
CGCGGTGGCT TTACCGGTTT GCTGCTTGGC TCGATTAGCC AGGGATTGTT GCAGCATTCT
TCGAGGCCTG TGTACGTTGT GCCGCGCAAG TATGTGGAAT TTAGTGCAGC TCAGGTTGCG
GCAGCGCAAA AGCAGCATTC TGAAGCGTCT ATTGACGATA TTTCCGGAGT ACATGAGGTT
GATGTGCCGA AGGCTGGTAA AGAAGCTGCT AAGGAGATTG AGCAAACAAT CGATCCGTTG
CGATAA
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| Protein sequence | MIPEKAVLVG VDGSHASYKA VWWAANYAKH AGLQLQIVCA YSLPSYAAVS FDATYTAIGD
DNAAHHDAQE ILSKAKAVAL EQGVDATTLI VTGDPSSVFV ELSRNYQLIV IGNRGKGGLA
ERLLGTTSSS LPAYAYCPIV VVPYTDDDGQ RIHLNNTITR VAVGSDESKW GLKALEIAAD
LADSWHAELD VISAVPRVQG AEGDTAVMGS YMEDLEERVK PILQRLPDLQ IHRTVVPGSA
VEALTQASLN HDLVVVGSRG RGGFTGLLLG SISQGLLQHS SRPVYVVPRK YVEFSAAQVA
AAQKQHSEAS IDDISGVHEV DVPKAGKEAA KEIEQTIDPL R
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