| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0335 |
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| Symbol | rpmF |
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| ID | 8708787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 363615 |
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| End bp | 363809 |
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| Gene Length | 195 bp |
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| Protein Length | 64 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 646482452 |
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| Product | ribosomal protein L32 |
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| Protein accession | YP_003373589 |
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| Protein GI | 283782835 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0333] Ribosomal protein L32 |
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| TIGRFAM ID | [TIGR01031] ribosomal protein L32 |
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| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACTGC CTAAGTATAA GACCTCGCGT GCTAATACGC ATTCGCGTCG CGCTAATTGG
AAGGCGTCTG CCGTGCAGAC TGTGACTTGC CCGAACTGCG GTTCTCAGGC ATTCCCACAC
ATGGCTTGCC CATCTTGCGG AACCTTCCGT GGTCGTGTTT ATCGTGAAGC TATTCGCTCC
GAGCACACCA AGTAG
|
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| Protein sequence | MALPKYKTSR ANTHSRRANW KASAVQTVTC PNCGSQAFPH MACPSCGTFR GRVYREAIRS
EHTK
|
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| |