Gene HMPREF0424_0311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHMPREF0424_0311 
SymbolrplI 
ID8709192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGardnerella vaginalis 409-05 
KingdomBacteria 
Replicon accessionNC_013721 
Strand+ 
Start bp337627 
End bp338073 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content51% 
IMG OID646482428 
Productribosomal protein L9 
Protein accessionYP_003373565 
Protein GI283782811 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0359] Ribosomal protein L9 
TIGRFAM ID[TIGR00158] ribosomal protein L9 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0979697 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAA CCAAGGTTAT TCTTACCAAG ACTGTTGCCA ACCTCGGTCA CTCTGGTGAC 
GTTGTTGAAG TTAAGGCTGG CTATGCTCGC AACTACCTGA TTCCTCAGGG TCTTGCTTTT 
GCATGGAACA AGGGTGCTGC TTCCCAGATT GAAGCAATGC GTCGCGCTCG TCTTGCCAAG 
GCTGTTGCCA CTCGTGAAGA GGCAGTTGCA GCTAAGGCTC AGATTGAAGG CACCGTTGTG 
GAGCTTTCTG CTAAGGTTTC CGAATCCGGC AAGCTTTTCG GTGGCATTTC TGCCGAGAAG 
ATTGCTGCCG CTTTGGCTTC CAAGGCTCAA GTTGAGGCTC GCGCAATTAA GGTTGCTACT 
ATTAAGACCA CTGGTGAGTT CCCAGCAACC GTAACATTGC ATCCGGAAAT CACCGCTTCC 
TTCACTGTTA AGGTTGTGGC TGAGTAA
 
Protein sequence
MAETKVILTK TVANLGHSGD VVEVKAGYAR NYLIPQGLAF AWNKGAASQI EAMRRARLAK 
AVATREEAVA AKAQIEGTVV ELSAKVSESG KLFGGISAEK IAAALASKAQ VEARAIKVAT 
IKTTGEFPAT VTLHPEITAS FTVKVVAE