Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_0274 |
Symbol | rpmJ |
ID | 8708883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | + |
Start bp | 295572 |
End bp | 295685 |
Gene Length | 114 bp |
Protein Length | 37 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 646482392 |
Product | ribosomal protein L36 |
Protein accession | YP_003373530 |
Protein GI | 283782776 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01022] ribosomal protein L36, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTCA GCCCTAGCGT GAAGAGGATC TGCGAAAACT GCCGCGTGAT CCGCCGTCAC GGCCGCGTCA TGGTGATCTG CATTAACCCA CGTCATAAGC AGCGTCAGGG CTGA
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Protein sequence | MKVSPSVKRI CENCRVIRRH GRVMVICINP RHKQRQG
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