| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0235 |
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| Symbol | hisC |
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| ID | 8709507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 263722 |
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| End bp | 264819 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646482354 |
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| Product | histidinol-phosphate transaminase |
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| Protein accession | YP_003373496 |
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| Protein GI | 283782742 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
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| TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACATACA AACACCGCAA TATTGTAGAT ACAATTCCTA GCTACAAGCA GGGTAAGCCA
GCTCCTAAAT TAGACGGCAT TCGTGCGTAT AAGATTTCTA GTAACGAAAA TCCTTATGAG
CCTTTGCAAA GCGTAAAAGA AGCGATTTCA AATCGCGCTC TTAATGTAAT AAACCGTTAT
CCTAATATGC GTGGCACAGA AGTTGTTGAA GAACTTGCCA AGCGTTTTGG TGTGACTGCA
GACGAAGTCG TGCTTGGTTG CGGCTCTACG GAAGTTATTA CGCAGCTTGT TGACTTGGTT
GCAGGTCCGG GAGATGAGGT CATATATCCT TGGAGAAGCT TTGAAGCTTA TCCGATTATT
GTTACGGGTG CTGGAGCTAC AAGCGTTAAA ATCCCTAATC GTGCAGATGG GTCGCACGAT
GTGGACGCTA TGATTGCGGC TATTAGTGAT CGCACGCGTT TGGTTATTTT GAATAATCCT
AATAATCCAA CTTCTGCTTC ACTTAGCGAG GAGGAAGCTC GCAAGGTATT AGATGCTGTG
CCAAGCGACG TTCTTGTACT TATTGACGAA GCTTATGTGC AGTTTAACAC AGCAAAAGGC
ACTGCAAATG GCATAAAACT GTACCATGAG TATCCAAATG TAGTTGTTGC TCAAACGTTC
TCCAAGGCTT ATGGATTGGC AGGTTTGCGC ATTGGTTATG GTATTGCTCC GGCTGAAGTC
GTAGATGGTA TGCGTAAAGT TGCTGTGCCA TTTGGAGTGT CTCAAATAGC GCAGGTCGCA
GCTTTGGCTT CTTTGGAAGA TGACGCAAGC AAGGAGATGA GTACTCGTGT TGCATCTCTT
GTTGCTGAGC GTGAGCGCAT TCTTGAAGCT TTGCGCGAGC AAGGTTGGAA TATTGAAGAT
GCGTATGCAA ACTTCTTCTG GATGCCATTT GGGGCAGATA CCGAGCGGGC AACAGAACAT
TTTATTGCTG CAGGATTGTC TGTTCGCGCT TTTGCTGGTG AAGGTATTCG CATTAGTATC
GGCGAGCGCG AGGCTAATGA CAGGGTTTTG ACAGTTTGCG AAAATTTAAA AAACGAAGGT
TTTTCGCTAA ATAACTAG
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| Protein sequence | MTYKHRNIVD TIPSYKQGKP APKLDGIRAY KISSNENPYE PLQSVKEAIS NRALNVINRY
PNMRGTEVVE ELAKRFGVTA DEVVLGCGST EVITQLVDLV AGPGDEVIYP WRSFEAYPII
VTGAGATSVK IPNRADGSHD VDAMIAAISD RTRLVILNNP NNPTSASLSE EEARKVLDAV
PSDVLVLIDE AYVQFNTAKG TANGIKLYHE YPNVVVAQTF SKAYGLAGLR IGYGIAPAEV
VDGMRKVAVP FGVSQIAQVA ALASLEDDAS KEMSTRVASL VAERERILEA LREQGWNIED
AYANFFWMPF GADTERATEH FIAAGLSVRA FAGEGIRISI GEREANDRVL TVCENLKNEG
FSLNN
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