| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0232 |
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| Symbol | |
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| ID | 8708899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 261494 |
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| End bp | 261670 |
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| Gene Length | 177 bp |
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| Protein Length | 58 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 646482351 |
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| Product | regulatory protein, FmdB family |
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| Protein accession | YP_003373493 |
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| Protein GI | 283782739 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2331] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02605] putative regulatory protein, FmdB family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCCTACTT ATCATTATCG TTGCAAGCAA TGCGGATACG ATTTTTCAGA ACATCAATCA
TTTTCAGATG ACCCTATTAC CATTTGCCCT CAGTGCGGAA AAGATGCAGT GCACAAAGTG
TACTCTGCTC CTCCAATCAA CTTTAAAGGC AAAGGCTTTT ATCGAACCGA TAAATGA
|
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| Protein sequence | MPTYHYRCKQ CGYDFSEHQS FSDDPITICP QCGKDAVHKV YSAPPINFKG KGFYRTDK
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