| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0094 |
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| Symbol | |
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| ID | 8709700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 112562 |
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| End bp | 113329 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 646482215 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | YP_003373361 |
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| Protein GI | 283782607 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0351427 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGAAT CATATACGTG CTCAGATGTG CAACTTGTTA ATGTGAATTT TTCGTATGGG
AAAAAACAAA TTTTGCATAA TCTTTCTATA GATTTATCTT TTGGCATATG TGGTCTTTTG
GGGCCAAATG GTGCTGGGAA AACTACTCTG CTTAACGTTA TAGCGACGAT TTATGCTCCC
TCTAGTGGGA AACTTTTTGT TCATGGCTTT GACGTAACTG ATCGTGCGGA AAGGGCTAAA
GCTCGGTCAA ATATTGGTTA TTTGCCACAA TCATTTGAAC TTATGAATGC ATCGAGTGTG
TTAAAAAATG TTCAATATGC CGCATGGGCG CGAGGTCTAT CGTGGAGTGC TGCGTATCAA
GCTGCTTGGA ATGCTCTCAA ACAGGTTGGC TTGGAAAAAC AAGCACATCG CATAGTTGCA
AAAATATCAG GAGGTCAGCG TCAGCGTGCT GGTATTGCTT GTGTGATTGC TAGTCAGCCT
GCAGTACTAA TACTTGATGA GCCTACTGTT GGTTTAGATC CTGAGCAGCG TATTGATATT
CGTAATTTTC TTAAGTCTTA TTCGCAAAAG CATACTGTTA TTGTCAGTAC ACATTTAGTA
GAAGATTTAG CAGTAATTGC GGATCGGGTT ATAGTTCTTA ATGAAGGAAT TATATTGCTT
GATGGGAAAA TGGATAATCT TCTTCAGTAT GCTAATCGTG AAGATCTTAT GGTAACTCCA
TGGGAATCAG GGTATAGGCA TTTGCTATCT AAATTTCATA AAAATTAG
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| Protein sequence | MQESYTCSDV QLVNVNFSYG KKQILHNLSI DLSFGICGLL GPNGAGKTTL LNVIATIYAP
SSGKLFVHGF DVTDRAERAK ARSNIGYLPQ SFELMNASSV LKNVQYAAWA RGLSWSAAYQ
AAWNALKQVG LEKQAHRIVA KISGGQRQRA GIACVIASQP AVLILDEPTV GLDPEQRIDI
RNFLKSYSQK HTVIVSTHLV EDLAVIADRV IVLNEGIILL DGKMDNLLQY ANREDLMVTP
WESGYRHLLS KFHKN
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