Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_0027 |
Symbol | |
ID | 8709269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | - |
Start bp | 31645 |
End bp | 32037 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 646482150 |
Product | putative septation inhibitor protein |
Protein accession | YP_003373298 |
Protein GI | 283782544 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGATG AAGAATTGCA CACGACTGCA GCTGACGACG CTGCAAAGAA GAGCGATACG TCAAATGAGA ATACTTATGG CGTTCCTATG GACGAAGTTG AAGCAGTGTT GAATGCTACT GCGGATAAAG CAGCGCTTTC TCCACAGATT CAGCAAATGA TGCAGAGACA AGCTGAAAAT AGGCGACGTG TCGAAGAAAG CATTAAAGGC ACAAAAGCTA ATGCTGCATG GTTTGTGCCG CTGTTCTGCA CATTAATGGT CGTTGGATTA ATTTGGGCTG TTGTTTATTA TTTGAACCCT GTGCTTCCAA TTCCTGGAAT TGGTGCATGG AATTTAGTTA TTGCATTAGT AATAGTAATG ACTGGATTCA TTATGACAAT GTGGTGGCGT TAG
|
Protein sequence | MADEELHTTA ADDAAKKSDT SNENTYGVPM DEVEAVLNAT ADKAALSPQI QQMMQRQAEN RRRVEESIKG TKANAAWFVP LFCTLMVVGL IWAVVYYLNP VLPIPGIGAW NLVIALVIVM TGFIMTMWWR
|
| |