Gene HMPREF0424_0027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHMPREF0424_0027 
Symbol 
ID8709269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGardnerella vaginalis 409-05 
KingdomBacteria 
Replicon accessionNC_013721 
Strand
Start bp31645 
End bp32037 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content43% 
IMG OID646482150 
Productputative septation inhibitor protein 
Protein accessionYP_003373298 
Protein GI283782544 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATG AAGAATTGCA CACGACTGCA GCTGACGACG CTGCAAAGAA GAGCGATACG 
TCAAATGAGA ATACTTATGG CGTTCCTATG GACGAAGTTG AAGCAGTGTT GAATGCTACT
GCGGATAAAG CAGCGCTTTC TCCACAGATT CAGCAAATGA TGCAGAGACA AGCTGAAAAT
AGGCGACGTG TCGAAGAAAG CATTAAAGGC ACAAAAGCTA ATGCTGCATG GTTTGTGCCG
CTGTTCTGCA CATTAATGGT CGTTGGATTA ATTTGGGCTG TTGTTTATTA TTTGAACCCT
GTGCTTCCAA TTCCTGGAAT TGGTGCATGG AATTTAGTTA TTGCATTAGT AATAGTAATG
ACTGGATTCA TTATGACAAT GTGGTGGCGT TAG
 
Protein sequence
MADEELHTTA ADDAAKKSDT SNENTYGVPM DEVEAVLNAT ADKAALSPQI QQMMQRQAEN 
RRRVEESIKG TKANAAWFVP LFCTLMVVGL IWAVVYYLNP VLPIPGIGAW NLVIALVIVM
TGFIMTMWWR