| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0020 |
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| Symbol | trpS |
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| ID | 8709730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 23867 |
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| End bp | 24958 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646482143 |
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| Product | tryptophan--tRNA ligase |
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| Protein accession | YP_003373291 |
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| Protein GI | 283782537 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.15256 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGGAAG AAGCACAGGT TACAGCTGCT GGTAATGAGA TGAGCGCAAG CTTCCTTGCA
GCGCGTAAAC GTTCAGATGC AACGCTTGAA AAGTTACAAG CTAGCCCTTC GTCTTTTACT
ATGCTTACTG GAGATCGCCC AACTGGTCGT TTGCATTTAG GACATTATTT TGGATCTATT
CGTGAGCGTG TTGCAATGCA GCAGCGCGGA GTAAAAACCA ATATTATTAT TGCAGATTAT
CAAGTAATTA CTGATCGTGA CACCACTGAG CATATTGAAG ATAATGTTTT GAATTTAGTG
CTGGATTATA TGGCTGCCGG AATTGATCCT GAAAAAACAA TGATATTTAC TCATTCCGCA
GTTCCTGCAG CAAATCAGCT TATGTTGCCT TTCCTTTCGC TTGTTACAGA AGCAGAATTA
CACAGGAATC CTACTGTAAA GTCGGAAATG GAATCATCTG GACATGCTTT AACCGGATTG
CTTCTTACGT ACCCAGTGCA CCAAGCTTGC GATATTTTGT TCTGCAAAGC TAATGTTGTG
CCGATTGGTA AAGATAATTT GCCGCACGTT GAAATCACTC GTACAATTGC GCGTCGTTTT
AATGAGAGAT ACGCAAAAAA GAATCCAGTG TTCCCAGAGC CAGCAGCAAT TTTGTCTGAT
GCTCCTGAAA TTCCAGGATT GGACGGACGA AAGATGAGCA AATCTTACGG TAACTCGATT
ATGCTCGGGG CTACTGCCGA AGAAACTGCC AAATTAATTA AGAAGAGTCC AACTGATTCT
GAGAGGATGA TTACTTTTGA TCCAGTAACT CGTCCGCAAG TTTCTGCACT TCTTACTACT
GCAGGTTTAG TTACAGGTAG GGATCCTAAA GAGATTGCTG AAGAAATTGG TAACGCTGGT
GCTGGCGCAT TGAAAGCTTA CGTAATTGAA AATGTAAATA ATTTCTTGGC ACCTCACCGT
GAGCGTCGTG CAGAACTTGC AAAAGATATG GATACTGTTC GAGACATTTT GCATGATGGC
AATAAGCGTG CAAATGCTAT TGCAGAAGAA ACGCTTTCCC AAGTGCGAGA TGCTATGGGA
ATGAAGTATT AA
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| Protein sequence | MPEEAQVTAA GNEMSASFLA ARKRSDATLE KLQASPSSFT MLTGDRPTGR LHLGHYFGSI
RERVAMQQRG VKTNIIIADY QVITDRDTTE HIEDNVLNLV LDYMAAGIDP EKTMIFTHSA
VPAANQLMLP FLSLVTEAEL HRNPTVKSEM ESSGHALTGL LLTYPVHQAC DILFCKANVV
PIGKDNLPHV EITRTIARRF NERYAKKNPV FPEPAAILSD APEIPGLDGR KMSKSYGNSI
MLGATAEETA KLIKKSPTDS ERMITFDPVT RPQVSALLTT AGLVTGRDPK EIAEEIGNAG
AGALKAYVIE NVNNFLAPHR ERRAELAKDM DTVRDILHDG NKRANAIAEE TLSQVRDAMG
MKY
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