| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_4412 |
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| Symbol | prfC |
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| ID | 5164894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | - |
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| Start bp | 5115851 |
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| End bp | 5117434 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640551894 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_001233128 |
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| Protein GI | 148266422 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000888652 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGC ATAATGAGAA AGAAATAAGC CGCAGGCGTA CTTTCGCCAT CATCAGTCAC
CCTGATGCAG GGAAGACAAC CATTACGGAA AAGCTTCTCC TCTTTGGCGG CGCCATCCAG
CAGGCCGGTG AGGTCCGGGC CCGCAAGGCT GCCCGCCATG CCACCTCCGA CTGGATGGAG
ATGGAAAAGC AGCGCGGCAT CTCCGTTACC TCCTCGGTTA TGAAGTTCAC CTACAGGGAT
TTCGAGATCA ACCTCCTCGA CACGCCGGGC CACAACGATT TTTCCGAGGA TACCTACCGT
ACCCTCACCG CCGTCGACTC GGTCCTCATG GTGATCGATT CGGTCAAAGG GGTGGAGAGC
CAGACCAAGA AGCTTCTCGA AGTCTGTCGC CTGCGCCATA CCCCGATCAT GACTTTTATC
AACAAACTGG ACCGTGAAGG GCGCGAGCCC CTTGACCTCC TCGACGACAT CGAGAGCACC
CTGAATATCC AGTGCGCTCC CATGACCTGG CCGGTCGGGA TGGGCAAACG GTTCCGCGGC
ACCTATCACC TTTACAGCAA AGAGCTGACC TTCTTCGATC CGGAGGCCGA TAAGGGTACC
GGTCAGACCA TAACCGTCAA GGGGCTGGAG GACCCACTCC TCGACGAGTT GCTGGGTTCC
CAGGTCGAGG AACTCCGAAA TGACGTGGAA CTCCTTGAAG GTGCAGCACA CCCCTTTGAG
CAGGAGGCAT ATCTCGCCGG TCTGCAGACG CCGGTCTTTT TCGGCAGTGC CATCAACACC
TTCGGCATCC AGCAGCTCCT TGACACCTTC GTTGAACATG CCCCGGCGCC TTTGCCGCGA
GAGACCGAGA GCCGTGCCGT TTCCCCTTAC GAGGAGCCGT TCACCGGCTT CACCTTTAAA
ATTCAGGCCA ACATGGACCC GGCTCACCGG GACCGCATCG CCTTCTTCCG CATCTGTTCA
GGGAAGTTTA TCCGCGGCAT GAAGGTGCGG CACATCCGTC TCGGCCGCGA GGTGCAGATC
GCCAACGCCA CCATCTTCAT GGCACAGGAT CGCACCAACG TGGACGAGGC CTACCCCGGC
GACATCATCG GCATCCATAA CCACGGCACC ATCAAGATCG GCGACACCTT TACCCAGGGG
GAAGAGCTCA AATATACCGG TATCCCCAAC TTTGCGCCGG AGCATTTCCG CAAGGTGCGC
CTTCTTGATC CGATGAAATC CAAAGCCCTG GAGAAAGGGC TCGTCCAGCT TGCCGAAGAG
GGGACGACCC AGGTCTTCCG CCCCCTGATG GGGAGCGACT GGATCGTCGG CGCCGTCGGT
CTTCTCCAAT TCGACGTGGT CATGCACCGG CTGGAGCATG AGTACAAGGT CAAGGCAGCC
TATGAGCCGG TTTCCTACGT TACCGCCCGC TGGGTAACCG GTGAGAAGAA AAAACTGGAA
GAGTTTGAGA AGAAGGAAGC GATGCACCTC TATCGGGACG GCGAGGGAAA TCTTGCTTAC
CTTGCTGCGA GCCAGTGGCG GCTTGACAAC ACCATGGAAA ACTGGCGGGA AATACAGTTC
CACGCCACCA GGGAACATAG CTGA
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| Protein sequence | MKKHNEKEIS RRRTFAIISH PDAGKTTITE KLLLFGGAIQ QAGEVRARKA ARHATSDWME
MEKQRGISVT SSVMKFTYRD FEINLLDTPG HNDFSEDTYR TLTAVDSVLM VIDSVKGVES
QTKKLLEVCR LRHTPIMTFI NKLDREGREP LDLLDDIEST LNIQCAPMTW PVGMGKRFRG
TYHLYSKELT FFDPEADKGT GQTITVKGLE DPLLDELLGS QVEELRNDVE LLEGAAHPFE
QEAYLAGLQT PVFFGSAINT FGIQQLLDTF VEHAPAPLPR ETESRAVSPY EEPFTGFTFK
IQANMDPAHR DRIAFFRICS GKFIRGMKVR HIRLGREVQI ANATIFMAQD RTNVDEAYPG
DIIGIHNHGT IKIGDTFTQG EELKYTGIPN FAPEHFRKVR LLDPMKSKAL EKGLVQLAEE
GTTQVFRPLM GSDWIVGAVG LLQFDVVMHR LEHEYKVKAA YEPVSYVTAR WVTGEKKKLE
EFEKKEAMHL YRDGEGNLAY LAASQWRLDN TMENWREIQF HATREHS
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