Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_4314 |
Symbol | lspA |
ID | 5163373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | + |
Start bp | 4986731 |
End bp | 4987222 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640551793 |
Product | lipoprotein signal peptidase |
Protein accession | YP_001233030 |
Protein GI | 148266324 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0597] Lipoprotein signal peptidase |
TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00081258 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTGA AATATCTCAT CCTCCTTACC GTATCGATCC TGGTGATCGG CATCGACCAG GCGACGAAGC TCTTCGTCAA TAAGGTCATG GACCTCCACA GCTCCATAAC CGTGGTGCAG AACTTCTTCA ACATCACCTA CATGCGCAAC AAGGGGGCTG CATTCAGCTT CCTCTCCAAC TTCAACTACC GCATACCCTT CTTCATCCTC GTGTCGCTGG TCGCCGTCGT CGTCATCATC AGCGTTATCT ATAAACTGCG CCCCGACCAG AAATTCGCCG CCCTCTCCCT CTCCCTCATC CTGTCCGGGG CTCTCGGCAA TCTCATCGAC CGGGTCCGGC TCGGCGAGGT GATCGACTTC CTCGACGCCC ATTGGTACGA ACACCATTGG CCCGCCTTCA ACGTGGCCGA CTCGGCCATC TGCGTCGGCG TCTTCCTCCT GGCCATCGAC ATGTTCCTGG AGGAACAGCG GCAAAAGAAA CAGAAGGATT AG
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Protein sequence | MKLKYLILLT VSILVIGIDQ ATKLFVNKVM DLHSSITVVQ NFFNITYMRN KGAAFSFLSN FNYRIPFFIL VSLVAVVVII SVIYKLRPDQ KFAALSLSLI LSGALGNLID RVRLGEVIDF LDAHWYEHHW PAFNVADSAI CVGVFLLAID MFLEEQRQKK QKD
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