Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_3955 |
Symbol | |
ID | 5164983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | + |
Start bp | 4598731 |
End bp | 4601325 |
Gene Length | 2595 bp |
Protein Length | 864 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640551434 |
Product | ATPase |
Protein accession | YP_001232674 |
Protein GI | 148265968 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00218534 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCAGAC CGGATAAAAT GACCATTAAG ACCCAGGAAG CCCTGGCCCT TGCCCAGGAA ACAGCGGCGC AGCGGGGAAA CAGCTCCATC GAGCCGGAAC ATCTGCTGCT GGCCCTGCTG GAGCAGGAAG GGAGCCTGGT TGCCGCAATC CTGCAAAAGC TCGGCGCCAA TGCCGGCTTT GTGAAAAACA AGGCAATGGA AGCGCTCGAA AAACTCCCCA GGGCCAGCGG CGCCACCATG CAGATCTACC TGTCACCGGC GCTGAACCAG CTGCTGGACG CGGCCCAGAA GGAAGCCGAC ACCATGAAGG ACGCCTTCGT CTCCAGCGAA CACCTGCTTC TGGCGATGAT AGCGGCTAAG GGGAGCGCGG CTGCGCGGAT ACTCATGGAG AGCGGGGTGA GCCGTGAGGG GGTTCTCGCT GCTTTGAAGG ATGTCCGGGG TGAGGAACCG ATTACCGATC AGAATCCGGA GGACAAATAC CAGGCCCTGG CAAAATACGC CCGCGACCTG ACCGATCTGG CACGGCGGGG CAAGCTTGAT CCGGTCATCG GCAGGGACGA CGAGATCCGC CGGGTGATCC AGGTCCTGTC ACGGCGGACC AAGAACAACC CGGTCCTGAT CGGCGAGCCG GGGGTGGGGA AAACCGCCAT CGTCGAAGGG CTGGCCCAGC GTATCATCTC CGGCGACGTG CCGGAAACCC TCAAGGAGAA GAAGCTGGTG GCCCTCGACA TGGGCGCGCT CATCGCCGGG GCCAAATACC GGGGGGAATT CGAAGATCGG CTCAAGGCGG TGATCAAGGA AGTGGAAAAA TCCGAAGGGA AGATCATTCT CTTCATCGAC GAGCTTCACA CCCTGGTTGG CGCTGGAGCT GCGGAAGGGG CAATGGACGC ATCCAACATG CTCAAGCCCG CCCTGGCAAG GGGTGAGCTG CACTGCATCG GAGCCACCAC CCTCAACGAA TACCGCAAGT ACATCGAAAA GGATGCTGCC CTGGAGCGCC GCTTCCAGCA GGTATACACC GGAGAGCCGA GCGTTGAGGA CACCATCGCC ATCCTGCGCG GTCTCAAGGA AAAGTATGAA AACTTTCACG GCATCCGCAT CAAGGACAGC GCCATCATCG CCGCAGCCAC TCTCTCCGAC CGGTACATCA CCGACCGCTT CCTTCCGGAC AAGGCCATCG ACCTGATCGA CGAAGCAGCC TCCAGGCTCC GGATCGAGAT CGACTCCATG CCGACCGAGA TCGACGAGGT GGAGCGCAAG ATCATCCAGC TGGAAATTGA GAAACAGGCC CTGCTCCGCG AGCAGGACCC CCATGCCCAG GAGCGGCTAA AGAAGCTCTC CGATGAGCTG GAAGAGCTGA AAGGCCAGTC GGCAACCCTC AAGACACACT GGCAGCAGGA AAAAACGATC CTGACCGCCA TCAGTGACCT GAATAAAAGA TTGGAAGAGA AGAAGGAAGA AGCAAAGAAA AGCGAGCGGG AAGGAAACCT GGCCAAAACC GCCGAACTCC GTTACGGTGA GATTCCCGCC ATCGAGAAGG AAATCGCCGA AAAGAAGGAG GAACTGACCC GGCGGCAAGA GGAAGGGAAG ATGCTCCCCG AAGAGGTTGA CGGCGACATG GTGGCGGAGA TCGTCGCCAA GTGGACCGGC ATCCCGGTCA GCCGCATGCT GGAAACCGAA TCGGAAAAAC TGGTCAGAAT GGAAGAGCGG CTGAAGAGCC GGGTAGTCGG CCAGGATGAT GCCCTCACCC TGGTCGCCAA TGCGGTGCGC AGGGCGCGCT CCGGGCTCTC CGACCCCAAC CGCCCCATCG GCTCCTTCAT CTTCCTCGGC CCTACCGGTG TGGGCAAGAC CGAGACTGCA CGGGCTTTGG CCGCGTTTCT TTTCGACGAC GACCAGTCCA TCGTCCGCAT CGACATGAGC GAATACCAGG AAAAGCACAC GGTGGCCCGG CTCATCGGTG CGCCCCCCGG TTATGTGGGC TACGAGGAAG GTGGCCAGCT CACCGAGGCG GTGCGCCGTC GCCCATACAG CATCGTCCTC TTCGACGAAA TCGAAAAGGC GCATCCCGAA GTTTTCAACG TGCTGCTCCA GGTGCTCGAC GACGGCCGGC TCACCGACGG CCATGGGCGC ACCGTGGATT TCCGCAACAC GGTCATCATC ATGACCAGCA ACCTGGGCTC CCAGTGGATT CAGCAGTACG GCGTCAGCGA CTACGCCAGG ATGCGGACCA TGGTCATGGA AACCCTCAAG GAGAACTTCA AGCCGGAATT CCTCAACCGG CTGGACGAGA TCGTCATCTA CCACGCCCTC CCCCTCGATC AGATCAAACA TATCGTCGCG ATCCAGATCA AGGCCCTGCA AGACCGCCTT GCGGAACGTC ACCTGACGCT GGAGATCACC GACAAGGCCC GCGAATTCCT TGCCCATGAA GGATACGATC CAGCCTACGG CGCCCGGCCG CTGAAACGGA CCCTGCAGAA AAAAATCCAG GACCCGCTGG CGCTGATGCT CTTGCAGGGG AAATTCGAGG AGGGGGATAT TGTCCAGGTG GACCTTGCCA TGACCGGTGA CAGCTTGGTG ATAAAGAAGA AATAG
|
Protein sequence | MIRPDKMTIK TQEALALAQE TAAQRGNSSI EPEHLLLALL EQEGSLVAAI LQKLGANAGF VKNKAMEALE KLPRASGATM QIYLSPALNQ LLDAAQKEAD TMKDAFVSSE HLLLAMIAAK GSAAARILME SGVSREGVLA ALKDVRGEEP ITDQNPEDKY QALAKYARDL TDLARRGKLD PVIGRDDEIR RVIQVLSRRT KNNPVLIGEP GVGKTAIVEG LAQRIISGDV PETLKEKKLV ALDMGALIAG AKYRGEFEDR LKAVIKEVEK SEGKIILFID ELHTLVGAGA AEGAMDASNM LKPALARGEL HCIGATTLNE YRKYIEKDAA LERRFQQVYT GEPSVEDTIA ILRGLKEKYE NFHGIRIKDS AIIAAATLSD RYITDRFLPD KAIDLIDEAA SRLRIEIDSM PTEIDEVERK IIQLEIEKQA LLREQDPHAQ ERLKKLSDEL EELKGQSATL KTHWQQEKTI LTAISDLNKR LEEKKEEAKK SEREGNLAKT AELRYGEIPA IEKEIAEKKE ELTRRQEEGK MLPEEVDGDM VAEIVAKWTG IPVSRMLETE SEKLVRMEER LKSRVVGQDD ALTLVANAVR RARSGLSDPN RPIGSFIFLG PTGVGKTETA RALAAFLFDD DQSIVRIDMS EYQEKHTVAR LIGAPPGYVG YEEGGQLTEA VRRRPYSIVL FDEIEKAHPE VFNVLLQVLD DGRLTDGHGR TVDFRNTVII MTSNLGSQWI QQYGVSDYAR MRTMVMETLK ENFKPEFLNR LDEIVIYHAL PLDQIKHIVA IQIKALQDRL AERHLTLEIT DKAREFLAHE GYDPAYGARP LKRTLQKKIQ DPLALMLLQG KFEEGDIVQV DLAMTGDSLV IKKK
|
| |