| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3947 |
|---|
| Symbol | |
|---|
| ID | 5165209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 4592608 |
|---|
| End bp | 4593210 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640551426 |
|---|
| Product | membrane lipoprotein lipid attachment site |
|---|
| Protein accession | YP_001232666 |
|---|
| Protein GI | 148265960 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3417] Collagen-binding surface adhesin SpaP (antigen I/II family) |
|---|
| TIGRFAM ID | [TIGR02722] uncharacterized proteobacterial lipoprotein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000191679 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGATATC TACGTAGCTT GTTGCTCTGT CTTTCAATTG CCGCCATGTT TCTGGCCGGT
TGCGCCACCA CCACTGTCCA GTATGGTGAT GCCGGATCGG CAAAGCCGAT CGGCACCGAT
TTCGGCTCGT CCGATCTGCA GCAGATTGCC GAGGCAATGG TTGATTCCCT GATCACTTTT
CCACCAGTAG CCGAGCAGAC CAGCCAGCGG CGACCCGTTT TGAGCGTGGA CAAGGTGAAG
AACAAAACCA TGCAGCACAT AGATACGGAG TCGGTAACCG ACTCGATCAG GGCAAAACTG
ATCAAATCCG GCAAGTTCCG TTTTATTGAC CGGACCACGG ATGAAGCAGC CGTAGAGGAG
ATCAAGACCC AACAGGAAAG CGGCCTGGTT GATAAGAAGA CCGCCGTCGA GTTCGGCCGG
CAGATCGGCG CGGAATTTCT GCTGACCGCA AATTTCGCTG AAATCGTGCA GAAGGCGGGC
AGTGTTACAG ATGTCTATTA TAAGTTCACC ATGAACCTGA AGAACCTGAA AACGGGCATT
CTCGAATGGT CGGACGAGAA GGAGATCCGC AAGATCTCCA AACGGTCCAT GTTTGGGGGG
TAG
|
|---|
| Protein sequence | MRYLRSLLLC LSIAAMFLAG CATTTVQYGD AGSAKPIGTD FGSSDLQQIA EAMVDSLITF
PPVAEQTSQR RPVLSVDKVK NKTMQHIDTE SVTDSIRAKL IKSGKFRFID RTTDEAAVEE
IKTQQESGLV DKKTAVEFGR QIGAEFLLTA NFAEIVQKAG SVTDVYYKFT MNLKNLKTGI
LEWSDEKEIR KISKRSMFGG
|
|---|
| |