Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_3914 |
Symbol | |
ID | 5164307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | + |
Start bp | 4563176 |
End bp | 4564024 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640551396 |
Product | apurinic endonuclease Apn1 |
Protein accession | YP_001232636 |
Protein GI | 148265930 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0648] Endonuclease IV |
TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTACT TAGGCGCGCA CATGTCCATT GCCGGCGGCC TGCACAACGC CCCCGATCGG GGCGTGAAAG CCGGCTGCGG CGTGATCCAG GTTTTCACCC AGAACTCCAA CCAGTGGCGC GGCAAGGCGA TCTCGGACCC GGATGTCGCC CTCTTCAAAG AAAAATTGAA GGAATCGGGC CTCCACGAAA TCATCAGTCA CGACATCTAC CTCATCAACC TTGCCGCAGC GCCCGGCGAG GTGCGGGACA AGAGCCTGGC CGGCTTTCAG GAAGAGATGG AACGCTGCGC CCGTCTCGGC ATCGGCAAGA TCGTCATGCA CCCGGGCGCC CACAATGGTG ACGGCGAAGA AACAGGGCTC CGGCGGATCG TCGAGGCCTT CGACCATCTC TTCGAAAATA CGCCCGCCTA CACCGGCATG ATCCTCCTGG AAACCACTGC CGGCCAGGGA ACCAACGTCG GCTACACCTT CGAGCACCTG CGGGCGATCA TCGACGGTTC GGCCCATCCC GGCCGCTTCG GCATCTGCTA CGACACCTGC CACACCTTCG CCGCCGGCTA CGACATCACC AGCGAAGCGG GCTACAAGGC GGTCTGGGAG GAGTTCGACC GGATCATCGG CATCGACCGG CTGCAATGCT TCCACATCAA CGACTCAAAA AAGGGACTCA ACTGCCGTGT GGACCGTCAC GAGCACATCG GTCAGGGAGC CATTGGGTTA AGCGCCTTCC GCTTCATCAT GAACGACCCG CGTTTCGTCA AAATCCCCAA GATCCTGGAG ACCCCCAAGG GGGACAACGA CGAGATGGAC GGGGTAAATT TGAAAACTCT GCGTGATCTG GTGGAATAG
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Protein sequence | MDYLGAHMSI AGGLHNAPDR GVKAGCGVIQ VFTQNSNQWR GKAISDPDVA LFKEKLKESG LHEIISHDIY LINLAAAPGE VRDKSLAGFQ EEMERCARLG IGKIVMHPGA HNGDGEETGL RRIVEAFDHL FENTPAYTGM ILLETTAGQG TNVGYTFEHL RAIIDGSAHP GRFGICYDTC HTFAAGYDIT SEAGYKAVWE EFDRIIGIDR LQCFHINDSK KGLNCRVDRH EHIGQGAIGL SAFRFIMNDP RFVKIPKILE TPKGDNDEMD GVNLKTLRDL VE
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