| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3878 |
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| Symbol | |
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| ID | 5166353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | - |
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| Start bp | 4527335 |
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| End bp | 4528753 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640551360 |
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| Product | 2-hydroxyglutaryl-CoA dehydratase, D-component |
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| Protein accession | YP_001232600 |
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| Protein GI | 148265894 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1775] Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGTA CCCACATATT CCATTATCCG GAAGAATTAA AAGCGGACTT CATTAAAACT
CCCGGACTGG ATTTCAAAAA CGGCAAACAT GTTTCAGCCG CTGAAATCTG GGATTTCATG
ACCATTGAAG CACCGAAAAG ATTTCCCAAT GCCTTCGACC ACTCCCGCCG TTATTACGGC
AGGCTGTCCG ATGATGTCAC GTTCTTCACC GGTATCAAGC TGGGCTACAT GGCGCTTTCC
TTTCGCGACC GGCTGCTGGA GGCCCATGAG AGCGGCACAC CCATCATCCA TGTTGCCGGA
GGACAGACCG TTGATCCCTA CTTTGCCGCC GGCGGCATCC CCATTGTTCC GGGGCCGCTG
AGAGGCTGGG CGCGGGACAT GAAGGAGGGT CTGACTCTGC GTCAAGCGGA TCAGGTGGCC
AATGAAATTC TCGAAGCAGG CAGAATTACC GTATCCGTCG ATGCCTGCAA CAATCCGATC
GGCTCCATAT CGGCCATCAG CAAAGGTATT GTACCGGTGG ACCTGATCGC CCCCTACCTG
AACCTGCGCT GCACCGACAT CGGTTTTTCC ATCGAAGCGT ACAGGAATAA ATTCAATGGT
ATTCCCTTTA CCCTGATCGA CTATCCGATC ACCGGGGACA AGGAATCAGC CGTCGAGTAC
TTTGCCGACA TGCTCCGCCG GTTGATCAAG CAGATCGGCG ATATCCGCGG CAAACAGGCC
ACGGAAGAGG ATCTCTGGAA CGAGATCAAG CTGGAAAACC GGGGTCGCCG CGCAGCCCGC
GAGGTGACCG AGCTTGTCTG GTCTGCCGCT CTCCCCCCTG TTCAGAGCTC CAACCTGGGC
AGCCTGATCA CTACCGGCCG CTTTTCCTCC GGCGATTCCC TGGCAGCGAC CCAGCTCCTG
GAGCAGGCTA TCGTAGAGAT CAAGGAACGG ATCAAAAATT CCGTGGTTGC ACACGGCGTC
AGCTCCGATC CGGTGAAGCT GCTGGCATCC GGCTCCTGCT TTGGCTTGAA TGGCGAATTC
GTGGAGGCAA AGGGTGGCCT GCTCGTCGGC ACCGACGACC ACCTGAGCAA GATTTACGCG
GATGTGGACG AGACCGGCAA TGACCCATAC GTGAATCTGG CCAGAGCGGC GCTCACCTAT
AACTATGAGA AACCGGCCGA AGAACGCGCC CGGTACGTCG CCGACCTGGC GCGGAAATCG
GGCGCCGACG GGGTGGTATG CGGCTACAAC TGGGGTTGCA ACTACCAGTC GGCCACCTCC
CGACTGGTGG CGGACATCGT CAAGAAGGAA ACAGGCATTC CGACCATCAA CATCGAGGTT
GCCGAGCTTG GCCGCTCCGA AGCCACCGAG CAGACCCAGA ACCGGATTGA ATCGTTCATC
GAGATTCTGA AAAATGGTAA AGCCAAGAAA GCCGCATAG
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| Protein sequence | MSSTHIFHYP EELKADFIKT PGLDFKNGKH VSAAEIWDFM TIEAPKRFPN AFDHSRRYYG
RLSDDVTFFT GIKLGYMALS FRDRLLEAHE SGTPIIHVAG GQTVDPYFAA GGIPIVPGPL
RGWARDMKEG LTLRQADQVA NEILEAGRIT VSVDACNNPI GSISAISKGI VPVDLIAPYL
NLRCTDIGFS IEAYRNKFNG IPFTLIDYPI TGDKESAVEY FADMLRRLIK QIGDIRGKQA
TEEDLWNEIK LENRGRRAAR EVTELVWSAA LPPVQSSNLG SLITTGRFSS GDSLAATQLL
EQAIVEIKER IKNSVVAHGV SSDPVKLLAS GSCFGLNGEF VEAKGGLLVG TDDHLSKIYA
DVDETGNDPY VNLARAALTY NYEKPAEERA RYVADLARKS GADGVVCGYN WGCNYQSATS
RLVADIVKKE TGIPTINIEV AELGRSEATE QTQNRIESFI EILKNGKAKK AA
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