| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3672 |
|---|
| Symbol | glyS |
|---|
| ID | 5167066 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 4299724 |
|---|
| End bp | 4301790 |
|---|
| Gene Length | 2067 bp |
|---|
| Protein Length | 688 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640551156 |
|---|
| Product | glycyl-tRNA synthetase subunit beta |
|---|
| Protein accession | YP_001232398 |
|---|
| Protein GI | 148265692 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
|---|
| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0142363 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAAG AACTGTTCCT GGAAATTGGC ACCGAAGAGA TTCCTGCCGG GTTTCTTCCC
AAGGCCATGG CCGAGATGGA AGGCCTGATC AGGAAAGAGC TGGACAACGC CCGAATCGCC
TTCGGCGAGG TGAAAGCCAT GGCGACGCCC CGTCGTCTGG CGCTGGTGGT AAGCCAGGTG
GCCGGGCAGC AGGCCGATGC GGAGATTACC GCCATGGGGC CGGCGAAAAA GGTTGCTTTC
AACGAGGACG GCACGCCGAC CAGAGCGGGG GAGGGCTTTG CCCGCGGGCA AGGTGTGGAA
CCTTCCGCCC TCAGCATCGT GGTCACCGAG AAGGGCGAAT ACGTCGCCGT GACGAAAAAA
GAGACCGGTG TCCCCACTGT CGGGCTCCTT GGCGAGATTC TTCCCCGCCT GATCAACAAT
ATATCGTTCA AGAAATCCAT GCGCTGGGGG GATCTGGACG TCCGTTTCGC CCGCCCTGTG
CACTGGATCG TGGCTCTGTT CGACGGCATC GTCGTGCCGT TCAGTTTCGG CAACATCGAA
AGCGGCACCA TGTCCCGCGG CCACCGCTTC ATGGCCAACA CTTCGTTCCC GGTGCGCGAT
TTCACCCACT ATCTGGATGA GTGCGAACGG CACTTCGTCA TACCTGACCC GGCCAAGCGG
AAGGAGATTA TCCGCCGCGA GATTCACCGG GTGGCGAAGG CCGCCGGCGG GCGCCTCCTG
CCGGACGAAG GGCTGCTGGA GCAAGTCACC TATCTGGTGG AGTACCCGAG CGCAGTGCAC
GGCACCTTCT CTGCAGAATT CCTGGTGGTG CCGCGGGAAG TGCTCATTAC CTCCATGCGC
GAACACCAGC GTTATTTCTC CCTGGTGGAC GACAACGGCA AGCTCCTTCC CGGTTTCATC
ACCATTAACA ACACCCTCAC CGAGGACCCG TCCGTGGTGG TGAAGGGGAA TGAGCGGGTG
CTGCGCGCCC GTCTTTCCGA CGCCCGCTTC TTTTTCGACG AGGACAAGAA GGTCCCCCTG
GAGAATCGGG TCGAATCGCT GAAGAGCGTC CTCTATCAAG CCAAGCTCGG CACTTCCTAT
GAGAAGATGG AAAGGTTCCG GGCACTGGCC GAAGGGGTTG CAGAGGAACT CCAACCCGGG
TTGAAGGAAA AGGTTTCTCA AGCCGCCACC CTCTGCAAGG CGGATCTGGT GACGGGCATG
GTCGGTGAAT TCCCGGAGGT TCAAGGGATC ATGGGGCGTG AGTACGCATT TCTGCAAGGA
ATCGACCCGG GGGTGGCGAA CGCCATCGCC GAGCACTACC TGCCTACACA GGCAGGGGGG
GAACTGCCTG CTTCGGACAT CGGCGCCTTC GTCTCGATCG CCGACAAGCT GGACACCATC
TGCGGCTGCT TCAGCGTCGG CCTGATCCCG ACCGGCTCCG CCGACCCATA CGCACTGCGC
CGTGCCGCAC TGGGGATCAT CAACATCATT GTCGCCAAGG GGTATGCCCT GCAGCTGACA
ACCCTGGTTT CCAAAGCCCT TGCCCGGCTG GAAGGCAAAC TTACCCGGAA GAAAGAGGAA
GTCTTCGGCG ATGTGATGGA CTTTTTTCAA GGCCGCTTCG TCAACCTGAT GACCGACCGT
TTCCCTGCGG ATGTGGTGGA TGCGGTGGTG GCAGTCTCTT TCGACGATCT GGTCGATACT
GCCGCCAAGA TCGAGGCCCT CGCCGTATTC AAGAAGCGGC CCGACTTTGA GCCGCTGGCA
GTGGCTTTCA AGCGAGTCTG CAACATCGTC AAGGGCCCGG TAGTGGTGGT GGGAGTCAAT
GAACTGGACT TCGAAGAGGA CGCTGAAGGG ACGCTGCATC GGGCTTACCA TAGTGTTGCC
GGCACTGTTG CGGCAAAGGT CGCCGAGCGG GACTACCTTG CGGCCCTGAC GCAGATCGCC
ACCCTCAAGG GTGCGGTCGA CGACTTCTTC GACAATGTCA TGGTCATGGC CGAGGATGAA
CGGGTGAGGA ACAACCGGCT GGCCCTGCTT CAAGAGATTA AGGGCCTGTT CAGGGACATT
GCAGACTTTG CAAAAATAAC CGCTTAG
|
|---|
| Protein sequence | MTKELFLEIG TEEIPAGFLP KAMAEMEGLI RKELDNARIA FGEVKAMATP RRLALVVSQV
AGQQADAEIT AMGPAKKVAF NEDGTPTRAG EGFARGQGVE PSALSIVVTE KGEYVAVTKK
ETGVPTVGLL GEILPRLINN ISFKKSMRWG DLDVRFARPV HWIVALFDGI VVPFSFGNIE
SGTMSRGHRF MANTSFPVRD FTHYLDECER HFVIPDPAKR KEIIRREIHR VAKAAGGRLL
PDEGLLEQVT YLVEYPSAVH GTFSAEFLVV PREVLITSMR EHQRYFSLVD DNGKLLPGFI
TINNTLTEDP SVVVKGNERV LRARLSDARF FFDEDKKVPL ENRVESLKSV LYQAKLGTSY
EKMERFRALA EGVAEELQPG LKEKVSQAAT LCKADLVTGM VGEFPEVQGI MGREYAFLQG
IDPGVANAIA EHYLPTQAGG ELPASDIGAF VSIADKLDTI CGCFSVGLIP TGSADPYALR
RAALGIINII VAKGYALQLT TLVSKALARL EGKLTRKKEE VFGDVMDFFQ GRFVNLMTDR
FPADVVDAVV AVSFDDLVDT AAKIEALAVF KKRPDFEPLA VAFKRVCNIV KGPVVVVGVN
ELDFEEDAEG TLHRAYHSVA GTVAAKVAER DYLAALTQIA TLKGAVDDFF DNVMVMAEDE
RVRNNRLALL QEIKGLFRDI ADFAKITA
|
|---|
| |