| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3591 |
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| Symbol | |
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| ID | 5164207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | - |
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| Start bp | 4209864 |
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| End bp | 4213325 |
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| Gene Length | 3462 bp |
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| Protein Length | 1153 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640551076 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_001232318 |
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| Protein GI | 148265612 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.613742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGAAAAG ACAGGGCGGA ATATTTTCCC TTCGGTATCC AGATACGAAA AAAAATGTGG
AAGACGCTGG AGATGGCGCC TGTGTCCAGA GAGGTTCGGG CGCGTCGGCT GCCGGAAATC
ATGTTCTTTC GCGGCCTGGG AGACAGGCTG ACCAGATCCG GAGATCGGCC GGTGCAGGCT
GGGCAATTGA AGCTGTATGC CCTGCTCACC ACTGTCTTTC GCCATGTCAT AGACCTTTAC
ACCGAGGAAC AGCACCCCGG TGTTCTCGAT CAGGCGTTGG CTTCCGCCGG ATTTGCCTGT
GATTCCGAAA GGCTTTATAC TGTGCTGGAA AACTTTGTAG CGCTTTTTCC CGGTACTGCC
CAATTGTTCG GTGATGCAGC CGAGCTGACG ATCTGGCTGG CAGACGACGA TCCGCAGCAT
GGCAGAAAGA AGCTGGGGGC CAAAGAGCTG CTGCTGCTTG CCCTGGCAGG AGAAAACCGG
GCGGTGGAAG ATTTCCGCAG ATTGTTGGAC GATAGCGAGC TTGCTGCCAG AAGCGATTAC
CGTCTCGCAG TGGAAGGGAT GGAACGGGAA CTGGCCCGAG CTTTGCCGGT TAAGCCCTTT
GGCCTGTCCC TGCCGGACCT TTTACGTGCA CCGCTTAAGT CATCGCCCGC CTCGCTTTAC
GATCAACTGG AATACATCAG GCAAAACTGG CATGCAATTC TGCCTCCGGA ACTGCTCCTT
GAGATTTCCT CTGCATTCAC CGTCGTCCAT GAAGAGTCGC GAATTTTTGC CCCGCGTGGG
GAGCCGGGGG GGATTGCGGT GCCGAAGTTC GGCCGGGGTC CGGGTGACCA TTATCCCGAG
TACGAGCGCT TCTCTCCTGA CGCCGACTGG ATGGCCAACG TGGTGATGCT GGCCAAAATG
GTCTACGTCT GGCTCGACCA GTTGTCCCGG AAGTACCGGC GTGCCATCCA CCGTCTCGAC
CAGGTGCCGG ACGAGGAGCT CGATACCCTC TCCCGCTGGG GATTTACCGG CCTCTGGCTG
ATCGGCCTTT GGGAGCGGTC GCCGGCTTCG CAACGGATCA AGCAGATTGC CGGCAACCCG
GATGCCATCT CTTCCGCCTA CTCGCTCTAC GACTATGTCA TCGCCCATGA CCTGGGAGGG
GCGGAGGCAC TCGCAAGCCT CAAGGAGCGA TGCCGTCAGC GGGGCATCCG CCTGGCGAGC
GATATGGTGC CGAATCACAC CGGCATCTAC TCCAAATGGA CCATCGAGCA CCCCGACTGG
TTCGTCCAGC TGGATTATCC GCCGTACCCT TCTTACTCCT TCAACGGCCC CGACCTCTCC
TTTTCCCCCG AAGTCAGCCT CCACATCGAG GACGGTTACT GGGACAAGCG GGACGCGGCA
GTGGTGTTCA AACACTACGA CCACCGCGAC GGCCGGACCC GTTACATCTA CCACGGCAAC
GACGGCACCT CCACCCCCTG GAACGATACC GCCCAGCTCA ACTACCTCAT TCCACAGGTG
CGGGAGACGG TAATCCAGAC CATCCTCCAC GTTGCCCGGC AGTTCCCGAT CATCCGTTTC
GATGCTGCCA TGACCCTGGC CAAGAAGCAT TACCAGCGCC TCTGGTACCC CCAGCCCGGG
CTCGGCAGCG GAGTTCCGTC GCGCGCTGAG CACTGCATGA GCCGGGAGGA GTTCGACGCC
GCCTTCCCTG AAGAGTTTTG GCGCGAGGTG GTCGACCGGG TAGCTGCCGA AGCGCCGGAT
ACGCTCCTTC TCGCCGAGGC GTTCTGGCTC ATGGAGGGGT ATTTCGTCCG CACCCTCGGC
ATGCACCGGG TCTACAACAG CGCCTTCATG AACATGCTCA AGATGGAGGA GAATGCCAAG
TATCGCCAGA CGCTGAAGAA CGTCCTCGAA TACGACCACC GCATCCTGCC GCGCTTCGTC
AACTTCATGA GCAATCCGGA CGAAAAGACC GCTGTGGAGC AGTTCGGCAA GGAGGGGAAG
TACTTCGGCG CCTGCGTGCT GCTCGTCACC ATGCCGGGAC TCCCCATGAT CGGCCACGGC
CAGATCGAGG GGTTCCACGA GAAATACGGC ATGGAGTACC GGCGCTCATA CTGGGACGAA
CCGGTGGACG AGCACATGGT GCGGATGCAT GAAGAGAAGA TATTCCCGCT GATGCGCAAG
CGCTGGCTGT TCAGCGGTTC CGAGAACTTC GTTTTCTACG ATTTCTTCGC CGGCGGCCAC
GTGAACGAGG ATGTCTTTGC CTACTCCAAC CGGAAAGATT CCGAACGGGG GATCATCCTC
TACCACAACA AGTTCGCAGA AACAGCCGGC TGGATACGCA CCTCCACGTC CATTGCCGTA
AAAGACGGGG CGGGGGAAAC TGCACTGGTG CAGAAGACCT TGGGTTCCGC GCTGGACTTT
AATCCCGACG GCCGCTATTA CTACGGTTTC CGCGATTATG CGACCGGCCT GGAGTATATC
CGTTCAGGAC GCGAACTTTA TGAAAAAGGG CTCTTCGTCG AGCTTGAGGC CTTCGAATAC
CACGCTTTCC TCGATTTCCG CGAGATTATC GATGACGACT ACGGTACCTG GGGACGGCTC
TGCCATGATC TTGGCGGCAG GCCGGTCGCG AGCATCGACG AGGAGATCAA GCAGGTCAGG
TTCAAGGGGG TGATCGACCT TGCGCGCCAG CTTCTCGCCG ATCGACCGAT TTTGCTTTCC
GGGGAATTTG CCGTCACGGG AAAAGCGGAA AGTCCGGCAT GGGAGCCGCA TGCAGCGCGG
TTTACGGCAT TTCTTGAGGC ACTGGCCGTT TACGTGGAAG GATGGGAGCA GGTTCGGGCG
ATCGTCTCTG CAATTGCCCG GGAGCTTGCT TTTCTTGGCG GCCTGGCAAC GGAAGAAGGC
GACGGAGAGG TTGCTGCCGC CCGGAGACTG GCATTGCAAG CCATGTCCGG CGCCGGCGCG
CCGCAAATCG TTGCCGTTGC CTGGCTTTTC TTTCACCGGC TTGGAATGCT GAATGAGAAG
ACCGGCTGGG AGGTTCGTTC GGCCGAAATA TTGCATGAGT TCGGTCTTGA ACGTGCGGTG
GAAGAAGTTC TTTGTGCCGC GGCCGGCCGG CCGGATGCCG AACCTGCGTC CCTGGCGCCG
GCCGATTCCA TTATCCTTTT GCGGCTTATG GTTCGCTGGC AGGGGTTCCT TGATCTCCCG
GAAACGGGGC GGCTGCAAAT GCTGTTCGAC GATCCGCTTG TGCAGCAGTT CTGTCTGGTC
CATGTAAGCG ACGGCCGCCG GTGGTGCAAC AAGGAGCGTT TGGAGTTCCT GCTTCGCAGC
CTCTTTCTGG CAGCGGTGCT CAGAGCTTAC GGGGAGGTTG CTGAGAGCCG GGAGGCGCCG
GCTTTGTTGC CCCGTTTCTA CCGGCAGACC ACTCTGCTTC TGGAACAGGC TGCCGAGGCC
GGCTATCGGC TGGACGTGTA TCTAGGAGCC TGTCGGACTT AG
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| Protein sequence | MRKDRAEYFP FGIQIRKKMW KTLEMAPVSR EVRARRLPEI MFFRGLGDRL TRSGDRPVQA
GQLKLYALLT TVFRHVIDLY TEEQHPGVLD QALASAGFAC DSERLYTVLE NFVALFPGTA
QLFGDAAELT IWLADDDPQH GRKKLGAKEL LLLALAGENR AVEDFRRLLD DSELAARSDY
RLAVEGMERE LARALPVKPF GLSLPDLLRA PLKSSPASLY DQLEYIRQNW HAILPPELLL
EISSAFTVVH EESRIFAPRG EPGGIAVPKF GRGPGDHYPE YERFSPDADW MANVVMLAKM
VYVWLDQLSR KYRRAIHRLD QVPDEELDTL SRWGFTGLWL IGLWERSPAS QRIKQIAGNP
DAISSAYSLY DYVIAHDLGG AEALASLKER CRQRGIRLAS DMVPNHTGIY SKWTIEHPDW
FVQLDYPPYP SYSFNGPDLS FSPEVSLHIE DGYWDKRDAA VVFKHYDHRD GRTRYIYHGN
DGTSTPWNDT AQLNYLIPQV RETVIQTILH VARQFPIIRF DAAMTLAKKH YQRLWYPQPG
LGSGVPSRAE HCMSREEFDA AFPEEFWREV VDRVAAEAPD TLLLAEAFWL MEGYFVRTLG
MHRVYNSAFM NMLKMEENAK YRQTLKNVLE YDHRILPRFV NFMSNPDEKT AVEQFGKEGK
YFGACVLLVT MPGLPMIGHG QIEGFHEKYG MEYRRSYWDE PVDEHMVRMH EEKIFPLMRK
RWLFSGSENF VFYDFFAGGH VNEDVFAYSN RKDSERGIIL YHNKFAETAG WIRTSTSIAV
KDGAGETALV QKTLGSALDF NPDGRYYYGF RDYATGLEYI RSGRELYEKG LFVELEAFEY
HAFLDFREII DDDYGTWGRL CHDLGGRPVA SIDEEIKQVR FKGVIDLARQ LLADRPILLS
GEFAVTGKAE SPAWEPHAAR FTAFLEALAV YVEGWEQVRA IVSAIARELA FLGGLATEEG
DGEVAAARRL ALQAMSGAGA PQIVAVAWLF FHRLGMLNEK TGWEVRSAEI LHEFGLERAV
EEVLCAAAGR PDAEPASLAP ADSIILLRLM VRWQGFLDLP ETGRLQMLFD DPLVQQFCLV
HVSDGRRWCN KERLEFLLRS LFLAAVLRAY GEVAESREAP ALLPRFYRQT TLLLEQAAEA
GYRLDVYLGA CRT
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