Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_3503 |
Symbol | |
ID | 5164621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | - |
Start bp | 4123734 |
End bp | 4124618 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640550989 |
Product | transcription activator, effector binding |
Protein accession | YP_001232231 |
Protein GI | 148265525 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins [COG3449] DNA gyrase inhibitor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00111619 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGGCA AGGAGGGATA CGTAGTGCGC CCCAGCACCA CCAACAGCTA TCAGGAACGT CTGAACCGGG TTCTGATCCA CATCCAGAAG AACCTGGACG AACCGCTTAC CATCGAACGG TTGGCCGAGG TTGCCTGCCT CTCTCCGTTC CACTTCCATC GCATCTTCAG CGCCCATGTA GGGGAGACTG TGACCGGGTA CGTGCGCCGG TTGCGCCTGG AACGGGCCGC TACGAGGATC GCCTTCACAG GCGAAAGCGT GACGGATACG GCTCTGGGGG TGGGGTACGA GACGCCGGCA GCTTTTACCC GCGCCTTTCG CGAGCGGTTC GGCATGAGTC CCAGCGAGTT CCGTGGACAG CAGCGTGAAA CGATTCTTTC CTTTGCCGAA AATTCGACTG CGAAGGAGAT AATTGTCATG AAACCAGAGA TGAGGGAGTT TTCGAAAACC AAGGTGCTGT TCGTGAGGCG GACCGGAGCG TATGGAGAGG CTGCCACGGC CGCCTGGGAG GCGCTCATGG GCTTTGCCTA CAAAAATCGC CTGATGACCG GCGAGACGCT GATGGTCGGT ATCGGTCACG ACGACCCGGC TATCACGGCA GAGGAGAAGA TCCGCTATGA CGCCTGTGTC ACCTTTTCCG GGGATGTGAA GCCGGAAGGG GAAGTGGGGA TCCAGACCAT TGCCGGGGGT CGCTATGCCG TGTTTCTGCA CAAGGGGGCA TACACCGGGC TGCCGGAGAT TTACCGGAAC ATCTTCGCCG GCTGGCTTGC GACCAGTGGG TGCACCCTGC GTGACCAACC ATGCTTCGAG GTTTACCTGA ACCGCGACCC GCGCCGGACC AAGCCGGAGA ATCTGCGCAC CGAGATCTGG GTGCCGGTCG TGTAG
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Protein sequence | MFGKEGYVVR PSTTNSYQER LNRVLIHIQK NLDEPLTIER LAEVACLSPF HFHRIFSAHV GETVTGYVRR LRLERAATRI AFTGESVTDT ALGVGYETPA AFTRAFRERF GMSPSEFRGQ QRETILSFAE NSTAKEIIVM KPEMREFSKT KVLFVRRTGA YGEAATAAWE ALMGFAYKNR LMTGETLMVG IGHDDPAITA EEKIRYDACV TFSGDVKPEG EVGIQTIAGG RYAVFLHKGA YTGLPEIYRN IFAGWLATSG CTLRDQPCFE VYLNRDPRRT KPENLRTEIW VPVV
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