| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3368 |
|---|
| Symbol | aksA |
|---|
| ID | 5166358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 3953170 |
|---|
| End bp | 3954321 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640550854 |
|---|
| Product | trans-homoaconitate synthase |
|---|
| Protein accession | YP_001232098 |
|---|
| Protein GI | 148265392 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
|---|
| TIGRFAM ID | [TIGR02660] homocitrate synthase NifV |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATA TGGTGCACGG TGACATCATC ATCGACGACA CGACGCTACG GGATGGGGAG
CAGACCGCCG GAGTGGTCTT CAGCAAGAAG GAGAAGATTG CCATCGCCAG GATGCTCGAT
GCCATCGGCG TGCAGGAACT GGAATGCGGC ATTCCGGCCA TGGGAGAGGA GGAGCGCGAT
TCCATCCGCG CCCTTGTCGA TCTGGGATTG TCCGCCCGCC TCATCACCTG GAACCGGGCG
GTGATTCCCG ACATCCAGGC CAGTCTCGAC TGCGGCATCA TGGCTGTCGA CATATCCCTT
TCCGTGTCCG ATCAGATGAT TGCCCACAAA TTGCGCAAGA GCCGTGAGTG GGTGAAGGAG
CAGTTGAAGA CCGCCTTGGG GTTCGCCAAG GCACACAACC TCTACGTTTC GGTCGGGGGG
GAGGATGCCA GCCGGGCTGA TATCGGCTTT CTTTGCGAGC TGATGGAGAT CACCCGGGAG
CTTGGAGGGG ACAGGTTCCG CTTCTGCGAC ACCCTCGGTA TTCTTGATCC CTTTACCATG
TTCGACAGGG TCAGGGCACT GCGCAGCGGG GTGCCGGATT TGGATATCGA GGTGCACACC
CATAATGATC TGGGGATGGC GACCGCCAAT GCCATTGCCG GGATCAAGGC CGGCGCACGC
TTCGTCAACA CAACGGTCAA CGGCCTCGGA GAACGGGCCG GCAATGCGGC ACTGGAAGAG
GTGGTGATGG GTCTCAAGCA TGCCTGCGGC ATCGATCCCG GCGTCGACAC CCACCGCTTC
GTGGAGATCT CCCGTTTTGT CGGCAAGGCT TCCCAGCGGC CGGTGCCGGC CTGGAAAGCG
GTGGTAGGGG AACGGGTCTT TTCCCACGAG TCGGGGCTCC ATGCAGACGG CGTACTCAAA
AACCCGCTCA ACTACGAAGG CTTCGACCCG GCCGAGGTCG GACTGCACCG GCATATCGTC
GTCGGCAAGC ATTCCGGGAC CAGCGGGCTG GTGGAGCGTT ACAGGAATAT GGGCATTGTT
GTTAACAGAA AAGAGGCGGT CTGCCTCATG GAGCAGGTTC GAACCATTGC CCAGCGGATG
AAGCGGCCGT TGAGCGATAA GGACCTGCGC CGGCTTTACA AGTCCGAACA TCGTGGTCTG
AAAGCGGCGT GA
|
|---|
| Protein sequence | MKNMVHGDII IDDTTLRDGE QTAGVVFSKK EKIAIARMLD AIGVQELECG IPAMGEEERD
SIRALVDLGL SARLITWNRA VIPDIQASLD CGIMAVDISL SVSDQMIAHK LRKSREWVKE
QLKTALGFAK AHNLYVSVGG EDASRADIGF LCELMEITRE LGGDRFRFCD TLGILDPFTM
FDRVRALRSG VPDLDIEVHT HNDLGMATAN AIAGIKAGAR FVNTTVNGLG ERAGNAALEE
VVMGLKHACG IDPGVDTHRF VEISRFVGKA SQRPVPAWKA VVGERVFSHE SGLHADGVLK
NPLNYEGFDP AEVGLHRHIV VGKHSGTSGL VERYRNMGIV VNRKEAVCLM EQVRTIAQRM
KRPLSDKDLR RLYKSEHRGL KAA
|
|---|
| |