| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3300 |
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| Symbol | |
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| ID | 5165599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | - |
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| Start bp | 3876977 |
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| End bp | 3879682 |
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| Gene Length | 2706 bp |
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| Protein Length | 901 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640550786 |
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| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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| Protein accession | YP_001232030 |
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| Protein GI | 148265324 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01106] sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0342054 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCAGG TTTCCCTTGA AGAGTTTTAT CGGCGGCTCA GGACTTCGCC GTATAAAGGT
CTGAGCTCTG CCGAGGCTGC ATTGCGGTTG ACTAGGGATG GCCCCAATAC CCTTGTCCAG
CGCAAGCATG AGCCGGAGTT CGTGAAATTC CTGCGCCAGA TGATCAATCT GTTTGCCCTG
CTGTTGTGGG CCGGGGCCTT TTTGTCGTTT CTTGCCGAGT GGATACGGCC CGGCGAGGGG
AACGTCTTCA TCGCCGTTGC CCTGGTCGGC GTCGTACTTT TGAACGGGAC ATTCGGTTAT
TACCAGCAGC ACAAGGCCGA ACAGATCATG GCCAGTTTCC GCGATATGCT TCCCCCCATG
GCCAGGGTGA TCCGGGACGG GATACTTCGT CAGATTCCGG CGGCCCAGCT GGTCAGGGGG
GATGTGATCC TGCTTGAGGA GGGGGACCAG GTTCCGGCGG ATGCGCGTCT CTTCGAGGTT
TCAGGCCTGA AGGTGGACAA CTCTTCTCTG ACCGGTGAAT CGGAACCGCA ACTGCGCACC
ACCTATCAGA CGGATAAGCG TCTTCTGGAA AGCCGCAACG TGGTATTTTC CGGAACCACG
GCCCAGACAG GCGAGGGAAA GGCCGTGGTA TTCGCCACCG GGATGAAAAC ACAGATCGGC
CGTACCGCCG ACCTTACCCA GACCGTGGCA ACCCGTGAAA TCCCCATCCG CAGGGAAATC
CGCCACTTCA CCCGCATTAT CTCCCTGATT GCCGTTGTCA TGGGTGGCGT CGTCTTCCTC
GTCAGTTTTT TTCTCCTGGA AAACCCGCTG CTCGCCAAGC TGATCTTCGC CATCGGCATC
ATTGTCGCCA ATGTGCCGGA AGGTCTCCTT CCCACCGTCA CCCTCTGCCT CTCCATCGCT
GCCCGGCGGA TGGCCGAAAA CAAGGCCCTG ATCAAGAACC TGGAATCTGT GGAGACTCTT
GGCTGCACCA CGGTGATCTG CACGGACAAG ACCGGAACCC TCACCCAGAA CCGGATGGAA
GTGAAGCGGC TCTTTCTCAA TGAATGCATC CACACCGAGG CTGATGCTCG GTTTGAGCCG
GAGGAGCTGG AAAAACTACA GCTGGTGGCG AGCCTGTGCA ACAACGCCCA TCTGAAGCCG
GATGATCCGA CGCAGTATCT GGGTGATCCG ACCGAGGGGG CGCTGTTGGT CTTTTCCCAG
AGGTTTCATG ATGTGAACGT CTGCCAGGCG GCTTGTCCTC GCCTTTACGA GGAGCCGTTC
ACCGCTGCAA CGAAGCTGAT GGTGACCATC AACCTGGTTG AAGGGAAACA GCTGGCTTGC
CTGAAGGGGG CGCCGGATGT GGCCATCGGC ATGTGCGACA GCATCCTCAT CAACGGCAGG
CCGCTCCCCC TGAGCGAGGT CCACCGGCAG GCGTACCTCT CCGCCTACGA GGAATTTGCC
GGCAAGGGGG AGCGTGTGCT GCTCCTCGCC TATCGGGAGG TGGAGCCCCG CGAATCCTGG
CGCAACGAGG ATCTGCCGGG GGGCGGTTAC ATATTTGTCG GGTTGGTGGG TATGTTCGAT
CCGCCGAGGC CGGGGGTGCC GGAAGCGGTG ACGGCGATTC GCGGCGCCGG GGTCCGTGTG
GTGATGGTCA CCGGCGATTA CCAGACGACC GCCGTGGCCA TCGGCAGAAT GATCGGGTTG
GTGACCGTGG AAAAACCGGC GGTCATCACC GGCGAACAGC TGCGTGTCAT GGGCGATGCC
ATGCTGGAGT GGGAACTGGA GGAGAAGGAG GTGCTCTTCG CCCGCATCTC GCCGGAGCAG
AAGCTGCGTA TCGTCCAGGC GTTGCAGCGG CATGGCGAGG TGGTGGCGGT GACCGGCGAC
GGGGTCAACG ATGCCCCGGC ATTGAAACAG GCCGACATCG GCGTGGCCAT GGGGCTCTCG
GGGACCGACG TGGCGCGGGA ATCAGCGGAT ATGGTCCTCA TGGACGACAA CTTCGCCACC
CTCCTTCCTG CCATCAGGGA GGGGCGGACC ATCTTCGACA ACCTGAAAAA ATCCATTGCC
TATACCGTTA CCCATGCCGT GCCGGAGGTT GCCCCGTATC TGGCTTTTCT CCTGTTCGGC
ATCCCCTTGC CATTGACGGT AACGCTGATT CTCTCCATAG ACCTGGGGAC CGATATGCTT
CCTGCCATTG CCCTGGCTTC GGAACAGGCC GAACGGGACA TCATGCTGAT CCCTCCGCGG
TCCCGCAAGG AGCGGCTGGT CAGCGCAAGG CTCATCTTTC TCGCTTACGG CCTGCATGGG
GTATTGGAAG CAGTGGCTGC CTTCTATGCA TATTTCAGCG TGCTCCATGA CGGTGGATGG
CGGTCGGGGA CCCCGTTGGC GGCAAATGAC CCCCTTTACC TGAAAGCCGT ATCCGCCTTC
TTTGCCGCAA TCGTCATTTG CCAGGTGGCC AACGGCCTGA TGAGCAAGAC CCATCGCCAG
TCGCTGCTGC AACAGGGGGT TTTCTCCAAC CGCTGGCTGC TCGTGAGTAT TGCTATGGAA
CTGGCCCTGG CTGCTGCGAT TATCGGTCTG GAGCCTTTTC ACCTGCTTTT CGGTAACGCG
TCTCTGAATA TCGGCGACTT TTTCCTGGCC TGGCCATTTG CCGTCGGCAT GCTATTCCTG
GACGAGGGGC GGCGCTGGCT GATTCGGCGC AATGTGCGCT GGGTAATAAA ACTGACCGGT
TGTTGA
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| Protein sequence | MHQVSLEEFY RRLRTSPYKG LSSAEAALRL TRDGPNTLVQ RKHEPEFVKF LRQMINLFAL
LLWAGAFLSF LAEWIRPGEG NVFIAVALVG VVLLNGTFGY YQQHKAEQIM ASFRDMLPPM
ARVIRDGILR QIPAAQLVRG DVILLEEGDQ VPADARLFEV SGLKVDNSSL TGESEPQLRT
TYQTDKRLLE SRNVVFSGTT AQTGEGKAVV FATGMKTQIG RTADLTQTVA TREIPIRREI
RHFTRIISLI AVVMGGVVFL VSFFLLENPL LAKLIFAIGI IVANVPEGLL PTVTLCLSIA
ARRMAENKAL IKNLESVETL GCTTVICTDK TGTLTQNRME VKRLFLNECI HTEADARFEP
EELEKLQLVA SLCNNAHLKP DDPTQYLGDP TEGALLVFSQ RFHDVNVCQA ACPRLYEEPF
TAATKLMVTI NLVEGKQLAC LKGAPDVAIG MCDSILINGR PLPLSEVHRQ AYLSAYEEFA
GKGERVLLLA YREVEPRESW RNEDLPGGGY IFVGLVGMFD PPRPGVPEAV TAIRGAGVRV
VMVTGDYQTT AVAIGRMIGL VTVEKPAVIT GEQLRVMGDA MLEWELEEKE VLFARISPEQ
KLRIVQALQR HGEVVAVTGD GVNDAPALKQ ADIGVAMGLS GTDVARESAD MVLMDDNFAT
LLPAIREGRT IFDNLKKSIA YTVTHAVPEV APYLAFLLFG IPLPLTVTLI LSIDLGTDML
PAIALASEQA ERDIMLIPPR SRKERLVSAR LIFLAYGLHG VLEAVAAFYA YFSVLHDGGW
RSGTPLAAND PLYLKAVSAF FAAIVICQVA NGLMSKTHRQ SLLQQGVFSN RWLLVSIAME
LALAAAIIGL EPFHLLFGNA SLNIGDFFLA WPFAVGMLFL DEGRRWLIRR NVRWVIKLTG
C
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