Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_3160 |
Symbol | |
ID | 5165084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | - |
Start bp | 3730692 |
End bp | 3732842 |
Gene Length | 2151 bp |
Protein Length | 716 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640550645 |
Product | (p)ppGpp synthetase I, SpoT/RelA |
Protein accession | YP_001231894 |
Protein GI | 148265188 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000534468 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAGAC TCAACGACAT TCTGGATAAG GTTGCTTCCT ACAACCCGGC ATGCGACCTG GATTTAGTCC GAAAGGCGTA CGTCTTCTGT GCCAAGGTGC ACCAGGGGCA GACCCGCCTT TCCGGCGAGC CTTACCTGGT CCATCCCATG GAAGTGGCGG GGATTCTTGC TGACCTGAAG CTCGATGTTC CCACGGTGGT CACAGGACTT CTCCATGACA CTGTTGAGGA TACCCTGACC ACCCTTGAGG AGCTGGAGGG GATGTTCGGC GCCGAGGTTG CCAGGCTGGT TGACGGCGTC ACCAAAATCG GCAAGATCCA TTTCAAGACC AAGGAGGAAA GCCAGGCGGA AAACTTCCGC AAGATGCTCC TGGCCATGGC CAATGACATA CGTGTCATTC TGGTCAAACT GGCCGACCGG TTGCACAACA TGCGCACCCT TCAGTACCAG CCGGAGCCGA AACAGCGCAG CATTGCCAAG GAGACCCTCG ACATCTATGC ACCGATCGCC AATCGCCTCG GGATCTCCTG GGTGAAGAGC GAACTGGAAG ATCTGTCGTT CCGCTACCTT GATCCGCAAA TCTACTACGA TCTGGCATCC AAGGTCACAA AGAAGAAGAA AGAGCGTGAA TCCTATGTGG ATGAGGTCAT GCAGATCATC AAGGAAAAAC TGGCTGACCA CGGGATCACG GGCGAGGTTT CCGGAAGGAG CAAACATCTC TACTCCATCT ACCGGAAAAT GCAGAGCCGC AGTGTGGATA TCGACGAAAT CTATGACCTG GTCGCCATCC GCGTGATGGT CGAGGATATT CGCGAATGCT ATGAGGTGCT GGGGATAATC CATTCTACCT GGAAGCCGAT TCCCGGCCGG TTCAAGGATT ACATCGCCAT GCCCAAGGGG AACATGTACC AGTCTCTTCA CACCACCGTC ATCGGGCCTT ATGGCGAGAG GATGGAGGTG CAGATCAGGA CCGGGGAGAT GCACCGTGTC GCTGAGGCGG GGATTGCCGC CCACTGGAAA TATAAGGAGG GCAAGGGGTA CGACGAAAAA GAGGTGAAGC GCTTCACCTG GCTCCGGCAG CTCCTTGAGT GGCAGCAGGA GCTTGACGAT TCGCGGGAAT TCATGGACAC GGTCAAGGTG GAGCTGTTCC CTGAAGAGGT CTACGTCTTT ACTCCCAAAG GCGATGTCAA GGGGTATCCA AAGGGCTCGA CCCCCATAGA CTTTGCCTAC AGCGTCCATA CCGATGTGGG CCATCGTTGC GTTGGCGCCA AGGTAAACGG CAAGCTGGTG CCCCTGAAGT ATGAGCTGAA AAACGGTGAC ATCGTCGAAG TCATCACCTC CCCGCATCAC ACACCCAGCA AGGATTGGCT GAAGATTGTC AGAAGTTCCC GGGCGCGGAA CAAGATCCGC GCCTGGATCA AGACCGAGGA ACGTCTGCGT AGCATTACCC TGGGGCGGGA AATCTGCGAG AAAGAGTTTC GTCGTTATTC GCAGAACTTT GCCAAAATGC AGAAGACTGG CGAGATAAAA CGGGTGGCGG TGGAATTCGG CTTTGTCGGT GAAGATGACC TTATGGCGGC GGTTGGTTAT GGAAAGCTGT CCTGTAACCA GATATTGGGC AAGCTTTTCC CAACAGTGAA AATCGAAGAG GTCCAAGAGC ATAAAGAAAC ACGGATCGGC AAGGTAATCG CGAAGCTCAA GGGCAAATCC TCCAGCGCCA TTCAGATCAG CGGGGTGGAA GATGTGCTGG TTCGTTTCGG TAAATGCTGC AATCCTCTCC CCGGCGATGA CATCACAGGT TTTATTACCA GGGGGCGAGG GGTTACCGTT CATACCGCCG ATTGTCCCGT TGCCTTGGAT AGTGATCCGG AACGGCGCAT CGATGTGACC TGGAGCAGGG ATAAAAAGGC GGCCCTGCCG GTTAAAATCA GGGTTGCCTG CCATGATGAG AAGGGAATTC TGGCAAACAT CACTACGGCG ATCACCAATT GTGAGGCCAA TATCGTGAGC GCCTCCATCC AAAGCACCGT TGACAAGCGC GGCATCAATA CCTTCGAGGT GGATGTGACC GACCTGGATC ACCTGAACAG GGTCTTCAAC AGTGTGATGA AGGTGAAGGG CGTGATAAAA GTGGACAGGC TCAAGAGCTG A
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Protein sequence | MIRLNDILDK VASYNPACDL DLVRKAYVFC AKVHQGQTRL SGEPYLVHPM EVAGILADLK LDVPTVVTGL LHDTVEDTLT TLEELEGMFG AEVARLVDGV TKIGKIHFKT KEESQAENFR KMLLAMANDI RVILVKLADR LHNMRTLQYQ PEPKQRSIAK ETLDIYAPIA NRLGISWVKS ELEDLSFRYL DPQIYYDLAS KVTKKKKERE SYVDEVMQII KEKLADHGIT GEVSGRSKHL YSIYRKMQSR SVDIDEIYDL VAIRVMVEDI RECYEVLGII HSTWKPIPGR FKDYIAMPKG NMYQSLHTTV IGPYGERMEV QIRTGEMHRV AEAGIAAHWK YKEGKGYDEK EVKRFTWLRQ LLEWQQELDD SREFMDTVKV ELFPEEVYVF TPKGDVKGYP KGSTPIDFAY SVHTDVGHRC VGAKVNGKLV PLKYELKNGD IVEVITSPHH TPSKDWLKIV RSSRARNKIR AWIKTEERLR SITLGREICE KEFRRYSQNF AKMQKTGEIK RVAVEFGFVG EDDLMAAVGY GKLSCNQILG KLFPTVKIEE VQEHKETRIG KVIAKLKGKS SSAIQISGVE DVLVRFGKCC NPLPGDDITG FITRGRGVTV HTADCPVALD SDPERRIDVT WSRDKKAALP VKIRVACHDE KGILANITTA ITNCEANIVS ASIQSTVDKR GINTFEVDVT DLDHLNRVFN SVMKVKGVIK VDRLKS
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