| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3082 |
|---|
| Symbol | |
|---|
| ID | 5162970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 3601884 |
|---|
| End bp | 3603197 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640550576 |
|---|
| Product | phage integrase family protein |
|---|
| Protein accession | YP_001231826 |
|---|
| Protein GI | 148265120 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACCCC AAAATCGACA GCGCAAGCGT GAACAACGTA AACCCGGTCC TTTCACTGAC
AGGTTCATAA AAAGCCTCAA ACCTGAAAGC GAAATGTACC AGGTGCGTGA GGGACGAGGA
TTTGCCATCC GTGTTCTACC AACAGGGGTC AAAACCTGGT ACTACATCTA CACCTTTAAC
GGCAAACGCA GACAACTCAA TCTCGGCAAC TACCCTGACA AGAGCCTGGA AGACGCGCAC
AAGGTTTATC TGGAGTCCGC CGCCCTCGTA AAAAATGGCG TAGATCCCAT GGACAAACCC
GTTGCTGCAG ACCCACCACC CCCGCAGGTT GAGCTGACAG TGCGGCGCCT CGCCGTTGAC
CTCTATCTTG ATGAGTGGTC GAAGATCCAC CATTCGGAAA GATGGCATTA CAATAATAAG
AAAGCCCTGG AAGCCGATGT TTTGCCGGCC TGGGGTGACC GTTTGGCTGC CGATATTCGC
CGAAAGGATG CAGTGGAAAT TCTGGAGCTC GTGGCGAAAC GTGCGCCCGG CCAGGCCCGG
AATGTTCTGA AGGCGGCAAG GGGTATGTAT ACCTACGCCG TCGACAGGGA ACTGCTGGAG
TACAACCCTT TCACCGATAT CAAGATATCC AGGACAATCC CCAAGATGCA GCCCATGTCC
CGGGATCGTG AGCTCTCAGA AAAAGAAATC AAGCACCTCT GGAACGCGAT AGATGAAGGA
GGAGGGAGTG ACGGCACAAA GCGTGCGCTG AAATTAATCC TGATCACCGG TCAGAGACCG
GGTGAAGTCG TGGGGATGCA CCGGCAGGAA ATTGAAGGAA AATGGTGGAC GATACCGTGG
CAACGTATCA AGACCCGCAA GCGCCGCCAG GAAGATCATC GTATATACCT TTCGCCTCTG
GCCATGTCGC TTATCGGAGA TGGCAAGGGA TTCATCTTCT CCGATCCATC CGGCGAAAAC
TCCATGACTG AGAATGCCCT GAGTCACCAT GTTCGAAAAG ACATTCCGGA TACAGTAAAA
AAGCCGTATT ACGGTCTCCC CCGCTGGACG CCACATGATC TCCGCCGCAC GGCGGCTACC
AGACTGTCCA GGATCGGGGC ATCCGACGAA ATCATCGACG TAATTCTGAA CCACGCAAAA
AAAGGGGTTA GCGGAATTTA CAATCGGAAC AAGTACGACA AGGAAAAACA ACAGTGGCTC
ACCAAGTGGT CTCAGCATCT GGAGAAACTT ATAAATGGCA AACAAGCTGC CACCAGCACG
AGTAACCGTG GCAAAAAGCG AGGTAAGAAG GCCGGCGACG ACAAGAAATC TTGA
|
|---|
| Protein sequence | MTPQNRQRKR EQRKPGPFTD RFIKSLKPES EMYQVREGRG FAIRVLPTGV KTWYYIYTFN
GKRRQLNLGN YPDKSLEDAH KVYLESAALV KNGVDPMDKP VAADPPPPQV ELTVRRLAVD
LYLDEWSKIH HSERWHYNNK KALEADVLPA WGDRLAADIR RKDAVEILEL VAKRAPGQAR
NVLKAARGMY TYAVDRELLE YNPFTDIKIS RTIPKMQPMS RDRELSEKEI KHLWNAIDEG
GGSDGTKRAL KLILITGQRP GEVVGMHRQE IEGKWWTIPW QRIKTRKRRQ EDHRIYLSPL
AMSLIGDGKG FIFSDPSGEN SMTENALSHH VRKDIPDTVK KPYYGLPRWT PHDLRRTAAT
RLSRIGASDE IIDVILNHAK KGVSGIYNRN KYDKEKQQWL TKWSQHLEKL INGKQAATST
SNRGKKRGKK AGDDKKS
|
|---|
| |