| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_2869 |
|---|
| Symbol | |
|---|
| ID | 5164915 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 3329455 |
|---|
| End bp | 3330813 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640550365 |
|---|
| Product | integron integrase |
|---|
| Protein accession | YP_001231615 |
|---|
| Protein GI | 148264909 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | [TIGR02249] integron integrase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000684574 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTACTA TTCCGAATGC TGTTATGAGC CAATTTGAGG CGATCCTCAA CAAAAAGGAA
ATCCAACCCT CCCGATATAA CGAATACAAG AAATGGTTGC GGTATTTCCT CGATTTCTGT
TCTAAATATC CACTACCAGA GTCTAAAAAA GAGCGAATTC GTCTGTTCGG AGAAAAGTTA
CTAGAAAAGA AGCAGACGGC ACAGCAGCGT CAGCAGGCTA TCCATGCCGT TTTTCTATAT
TTTGAAATGC TAAGCCTGGA AATGCTTAGT AAAGAAACAG CCGATGGGAC AGATTCGCAG
TCATCGTTAA ACCCGGTTTC TGATCTGCCG CAAATCCCGG CTGCATACAA GCGCAAATCC
TTTTATACTC CGGCAGGGTA CCAGGATAAG TCCGACTCCT CAGAGTGGGA TGCGGTTTTG
GAGAAACTGG CAGAGGAGAT CAAGGTGCGC CATTATTCCC GCAAAACCTT GAAAACTTAC
GCACTTTGGT CGAGGCAGTT CCAGCGCTTT CTGAAGAACA AGCCACCGCA AGAGCTGTCA
ACCGCAGATG TGAAGGAATA CCTGACCTAT CTGGCGGTTA AATGCCATGT CGCGGCCTCA
ACCCAGAATC AGGCATTCAA CTCCCTGCTG TTTCTCTTCC GCCATGCCTT GCAAAGAGAT
TTCGGCGAGC TGCGAGACGT GCCGCGGGCG AAAAAGTCAC TTTATATCCC GGCGGTGCTT
TCCCGACTGG AAATCGACGC CATTCTGGAG CAGCTCTCCC ATCCATACAA TCTAGTTGTC
AAGATGCTGT TTGGCTGTGG TCTGCGGTTG TTTGAGGGAC TGCAACTGCG TGTGCGGGAT
TTCAATTTTG ACGTCAATAT TCTTACAGTT CACGGCAAGG GGAAAAAGGA TCGGACCGTA
CCACTGCCGG AATCAATCCT GACGGAGCTG AAGGCGCAAA TCAAGCGGGT TGGTGTGTTG
CATGACCGGG ATCTGGTTGC CGGATACGAC GGGGTGTTTC TGGACGATGC GGTGGAAAGG
AAATATCCCA ATGCGGCGAA GGAGTTCATC CATCAGTGGT TTTTCCCGCA GCAATCGCTG
ACAATGGTGG AAGAGACCGG TGAGCGGCGG CGCTGGCATC TTCACGAGTC GGAGCTGCAG
GAAGCGCTCT ACCATGCCGT TCGCCGGGCG AAAATCCCCA AGCGGGTTAC ATCCCACATC
TTCCGCCACT CCTTCGCCAC CCACCTCTTG CAAGCCAATT ACGACATCCG CGTCATTCAG
AAGCTTTTGG GACACGCCAG CCTGAAGACG ACCATGATCT ACACCCACTG CGTGCCGGTC
AGAACGGTGA AGGAGCCAAA AAGCCCGCTG GATTTCTGA
|
|---|
| Protein sequence | MITIPNAVMS QFEAILNKKE IQPSRYNEYK KWLRYFLDFC SKYPLPESKK ERIRLFGEKL
LEKKQTAQQR QQAIHAVFLY FEMLSLEMLS KETADGTDSQ SSLNPVSDLP QIPAAYKRKS
FYTPAGYQDK SDSSEWDAVL EKLAEEIKVR HYSRKTLKTY ALWSRQFQRF LKNKPPQELS
TADVKEYLTY LAVKCHVAAS TQNQAFNSLL FLFRHALQRD FGELRDVPRA KKSLYIPAVL
SRLEIDAILE QLSHPYNLVV KMLFGCGLRL FEGLQLRVRD FNFDVNILTV HGKGKKDRTV
PLPESILTEL KAQIKRVGVL HDRDLVAGYD GVFLDDAVER KYPNAAKEFI HQWFFPQQSL
TMVEETGERR RWHLHESELQ EALYHAVRRA KIPKRVTSHI FRHSFATHLL QANYDIRVIQ
KLLGHASLKT TMIYTHCVPV RTVKEPKSPL DF
|
|---|
| |