| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_2784 |
|---|
| Symbol | |
|---|
| ID | 5167084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 3239202 |
|---|
| End bp | 3240197 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640550280 |
|---|
| Product | TRAP dicarboxylate transporter, DctP subunit |
|---|
| Protein accession | YP_001231531 |
|---|
| Protein GI | 148264825 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.335515 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGA AAGCATTGCT CACATTCGCC CTCTTGACCG CATTCTCTTC AACTGCACTG
GCCGCCCCCA TCGTCATCAA GTTCAGCCAT GTTGTTGCCC AGCACACCCC CAAAGGACAG
GCCGCTGATT ACTTCAAGAA GCTGGCCGAA GAACGCACCA AGGGGCGCGT GAAGGTCGAG
GTTTACCCCA ACAGCCAGCT CTACAAGGAC AAGGAAGAGA TGGAGGCCCT GCAACTGGGC
GCAGTCCAGA TGCTGGCCCC TTCACTGGCC AAGTTTGCCC CGCTGGGGGT CAAGGACTTT
GAGGTATTCG ACCTCCCCTT CATCTTCGAC AACTACACAG AACTGCATAA GGTCACCCAA
GGCCCGGTCG GCCAGAAATT GCTCAAGAAA CTGGAGCCCA AGGGGATTAT CGGACTTTCC
TACTGGGATA ACGGCTTCAA GGTGATGAGC GCCAACAAGC CGCTCAAGAC CCCGGCTGAT
TTCAAGGGGC AGAAACTCCG CATCCAGTCC TCCAAGGTGC TCGATTCCCA GATGCGCTCC
GTAGGGGCCA ATCCCCAGGT GCTGGCCTTC TCCGAGGTAT ATCAGGCCCT GCAGACCGGC
GTCGTCAACG GCACCGAGAA TCCCCCCTCA AACCTCTACA CCCAGAAGAT GCACGAAGTG
CAGAAATACG TGACACTTTC CGACCACGGC TACCTTGGCT ACGCCGTCAT CGTCAACAAG
AAGTTCTGGA ATGGTCTGCC GGCCGACATA CGCACCATCC TGGAAGGCGC CATGAAGGAT
GCCACCAAGT ATGCCAACGA AATTGCCAAA AAGGACAACG ATGAGGCCCT CGCTGCCGTC
AAGAAATCCG GCCGGTCACA GCTGATCGCC CTGACCCCCC AGGAGCGGGC AGCTTGGAAG
AAGTCCATGG ACAAGGCCCA CAAGGAACAT ACGGGGCGTA TCGGCGCCGA CCTGGTGAAA
GAGGTTTACG CAGCCACCGG CTACAACCCG AACTAA
|
|---|
| Protein sequence | MKLKALLTFA LLTAFSSTAL AAPIVIKFSH VVAQHTPKGQ AADYFKKLAE ERTKGRVKVE
VYPNSQLYKD KEEMEALQLG AVQMLAPSLA KFAPLGVKDF EVFDLPFIFD NYTELHKVTQ
GPVGQKLLKK LEPKGIIGLS YWDNGFKVMS ANKPLKTPAD FKGQKLRIQS SKVLDSQMRS
VGANPQVLAF SEVYQALQTG VVNGTENPPS NLYTQKMHEV QKYVTLSDHG YLGYAVIVNK
KFWNGLPADI RTILEGAMKD ATKYANEIAK KDNDEALAAV KKSGRSQLIA LTPQERAAWK
KSMDKAHKEH TGRIGADLVK EVYAATGYNP N
|
|---|
| |