Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_2507 |
Symbol | |
ID | 5165487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | - |
Start bp | 2894741 |
End bp | 2898214 |
Gene Length | 3474 bp |
Protein Length | 1157 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640550003 |
Product | DNA polymerase III, alpha subunit |
Protein accession | YP_001231258 |
Protein GI | 148264552 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0587] DNA polymerase III, alpha subunit |
TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00161108 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGAAG CAAACTTTGT ACATTTACAT CTACACACCC AGTATTCCCT TCTGGACGGA GCGATTCGGC TCGGCGACCT GGTCAAGAAA GCCAAGGGGT ATGAGATGCC TGCCGTGGCC ATTACCGACC ACGGCAGCAT GTTCGGTGCC ATCGAGTTCT ACACCAAGTG CAAGGACAAG GGGATCAAAC CGATCATCGG CAGCGAGGTC TACATCGCGC CGGGGTCGCG TTTCAGCAAG GAGAGCGGCA ACGGCCACGA GTCGACGTCA AGCTACCATC TGATCCTGCT CTGCGAAAAC CTCCAGGGAT ACAAGAACCT TTCCTGGCTG GTCTCCGCCG GTTACAAGGA GGGATTCTAC TACAAGCCGC GCATCGATAA AGAGATTCTT GCCCAGCACA GCGAAGGCCT GATAGCCCTT TCCGCCTGCC TCAAGGGTGA GGTGGCTTAC CAGTGTGGTC GCAATCGAGT TGAAGATGCC ATTGCGACGG CCCGCTGGTA CTCGGAGATA TTCCCTGACC GCTACTACAT AGAGTTGCAG GAAAACACCC TGCCGGAACA GGATCTGGTC AACAAGCGCC TTCTGGATCT GGCTGCGGAA CTTTCACTTC CGCTTGTGGC GACCAATGAC TGCCACTACC TCAACCGGGA AGATGCCAAG GCACACGAGG TGCTCCTTTG CATCCAGACC GGCAAGACCA TGAACGATCC GAATCGCATG CACTTTTCCG CGGAAGAGTT CTACTTCAAG TCCCCCCAGG AGATGGCTGC GGCTTTCCAC TATGCGCCGG AGGCAATCGC CAATACTGTG CGCATTGCCG AGCGCTGCAA CCTGGAGCTG GATTTCAAGA CCTACCATTT CCCCCAGTAC ATCAAGCCCG CCGACAAGAC CCTCGACGAT GTCCTGGAGG AACAGTCCTA CGAAGGCCTC AAAGAGCGGC TGGTGACGGT ACGCGCCAAG TATCCGGACA TTACCCCGGA GCAGGAACAG GGCTACTATG AGCGGCTTCG CATCGAGCTG GATTGTATCA AGCAGATGGG ATTTCCCGGT TATTTCCTCA TCGTCGCCGA CTTCATCAAC TGGGCCAAGG ACCACGGCAT TCCGGTCGGC CCGGGCCGTG GTTCGGCAGC CGGTTCGCTG GTTGCCTATT CCATCCGCAT TACCGATATT GACCCGATCC CCTATAACCT ACTGTTCGAG CGGTTTCTCA ACCCGGAACG TATCTCCATG CCTGATATCG ACGTGGACTT CTGCCAGGAC CGCCGCGAGG AGGTGATCCA GTACGTCACC GAGAAGTATG GCCGGGACAA GGTCTGCCAG ATCATCACCT TCGGTACCAT GGCGGCCCGC GGCGTGTTGC GCGATGTAGG GCGGGCGCTG GACATGGCGT ACGGCGACGT GGACAAGATC GCCAAGCTGG TCCCCGAGGT GCTTGGCATC ACCCTGGACA AGGCTCTGCA GCAGGAGCCG AAATTGAACG AACTGGCTGC GGCAGATCGG CGTGTGAAGG AGCTGCTGGA CGTGGCCCTT TGTCTGGAAG GGTTGGCGCG CCATGCCTCA ACCCACGCCG CAGGGGTGGT TGTCGCCCCG GACGTGCTGG AGGAGTTCTG CCCGGTCTAC AAGGACCAGA AGAACGGCTC CATCACCACC CAGTATTCCA TGAAGTACGT GGAAAAGATC GGCCTCGTCA AGTTCGACTT CCTGGGTCTC AAGAACCTTA CGGTCATCCA TAACGCCGTC AAGATCATCC GTGCCGGCAA GGACCCGGCG TTCGATATCA CTTTACTGCG GGACGATGAT GAGGAGAGTT ACCGTCTCCT TCAGTCCGGC AACACCACGG GCGTCTTCCA GCTCGAGTCA TCCGGCATGC AGGGGCTCCT GGTCAAACTC AAGCCGTCCT GCTTCGAGGA TATAATTGCG GTCTGCGCCC TCTACCGGCC GGGCCCCCTT GGAAGCGGCA TGGTGGATGA CTTCATTGAC CGCAAACATG GCAAGAAAAA GGTGGTCTAC GACCTGCCGC AGTTGGAGCC GATCCTCAAG GACACCTACG GAGTCATCGT CTACCAGGAA CAGGTCATGC AGATCTCCCG GACCCTGGCC GGGTATTCAC TTGGGCAGGC CGACCTGCTC CGGCGGGCAA TGGGCAAGAA AGATCCGGAG GTCATGGCCA AGGAAAAAAT TCCTTTCCTT GCCGGCGCAA AAGAGCAGGG GATCGACCCG AAGAAGGCGG AGTCTATCTT CGACCTGATG GCCAAGTTTG CCGAATACGG CTTCAACAAG TCCCACTCCG CGGCTTACGC CCTGGTCGCC TACCAGACCG CCTATCTCAA GGCCCACTAC CCGGTGGAGT TCATGGCGGC ACTCCTGACT GAAGACATGG GGAACACCGA CAAGGTCATC AAGAACATCA GCGACTGTCG GGATATGGGG ATCGAAGTGC TGCCGCCGGA CATCAATGCC TCGGATCACT CCTTCCGCGT CCTTGGGAAA TCCATCCGTT TCGGCCTCGG TGCGGTCAAG AACGTCGGCG AGTCTGCTAT CGAGGCAATA ATCGAGTCCC GCAAGTCGGG ATCTTTTGCG GACATCTATG ACTTCTGCGA GCGGGTCGAC CTGCGCCGGG TCAACAAGCG GGTCGTTGAA TCCCTGGTCA AGTGCGGCGC CTTTGATTCC ACCGGCGCCA GGCGGGCTCC CCTCATGGCC GCGCTGGAAG ACGCCATGGT CTTGGGGCAG AAGATACAGC AGGAGCGGGA TAGCGCCCAG GTATCGTTGT TCGGTGTGGC GGAGATAGTC AGGGGGAACG GCAACGGCAA AGGTAGCCTG CCGGATGTGC CGGAATGGGA TGACAAGCTC CTTCTCAATC AGGAAAAGGA GGCCCTCGGT TTCTACATCA CCGGCCATCC CCTCGACCGC TATTCTTCCC AAATCAAGCG TTTTGCCACC GTGCATACCT CTGATTTCGG GGAAATATCC GACCGGGCCG AGGTGAAGCT CTGTGGCATA GTTGTGACGA AAAAGGAGTT CATCACAAAG AAGGGTGAGC GCATGGCCTT CGTTACCCTG GAAGATTTGC ACGGCTCCGT AGAAGTGGTG GTTCTGGCAA AGGTGTATGC CAAGGTCGCC CAGTACCTGG AGGGGGATGA TCCGCTCCTC GTCAGCGGCA GCGTAGAGGT GGGGGAGAAG AACACCAAGG TTATTGCGAG CGATATCGTG CTGCTCAGGG AAGTGAACGA AAGGGAGAGT CGACGGGTCC ATGTCACTGT CCAGGCGACC GGTCTGGAGC GGCCGCAGCT GGAGTCACTC AAGGGGATCA TCAACCGCTA CCCGGGCGCC TGCAAATCGT TTCTGCATAT CGTCATCCCC GCGGAATCGA AGACGACGAT AATTCTTCCG GATTCATACA AGCTTGCCGC CAGCGAAGAA TTATCACTGG ATGTGAAGAA CCTGCTGGGT TATAATGCCG TTTCTTTCGA GTAG
|
Protein sequence | MSEANFVHLH LHTQYSLLDG AIRLGDLVKK AKGYEMPAVA ITDHGSMFGA IEFYTKCKDK GIKPIIGSEV YIAPGSRFSK ESGNGHESTS SYHLILLCEN LQGYKNLSWL VSAGYKEGFY YKPRIDKEIL AQHSEGLIAL SACLKGEVAY QCGRNRVEDA IATARWYSEI FPDRYYIELQ ENTLPEQDLV NKRLLDLAAE LSLPLVATND CHYLNREDAK AHEVLLCIQT GKTMNDPNRM HFSAEEFYFK SPQEMAAAFH YAPEAIANTV RIAERCNLEL DFKTYHFPQY IKPADKTLDD VLEEQSYEGL KERLVTVRAK YPDITPEQEQ GYYERLRIEL DCIKQMGFPG YFLIVADFIN WAKDHGIPVG PGRGSAAGSL VAYSIRITDI DPIPYNLLFE RFLNPERISM PDIDVDFCQD RREEVIQYVT EKYGRDKVCQ IITFGTMAAR GVLRDVGRAL DMAYGDVDKI AKLVPEVLGI TLDKALQQEP KLNELAAADR RVKELLDVAL CLEGLARHAS THAAGVVVAP DVLEEFCPVY KDQKNGSITT QYSMKYVEKI GLVKFDFLGL KNLTVIHNAV KIIRAGKDPA FDITLLRDDD EESYRLLQSG NTTGVFQLES SGMQGLLVKL KPSCFEDIIA VCALYRPGPL GSGMVDDFID RKHGKKKVVY DLPQLEPILK DTYGVIVYQE QVMQISRTLA GYSLGQADLL RRAMGKKDPE VMAKEKIPFL AGAKEQGIDP KKAESIFDLM AKFAEYGFNK SHSAAYALVA YQTAYLKAHY PVEFMAALLT EDMGNTDKVI KNISDCRDMG IEVLPPDINA SDHSFRVLGK SIRFGLGAVK NVGESAIEAI IESRKSGSFA DIYDFCERVD LRRVNKRVVE SLVKCGAFDS TGARRAPLMA ALEDAMVLGQ KIQQERDSAQ VSLFGVAEIV RGNGNGKGSL PDVPEWDDKL LLNQEKEALG FYITGHPLDR YSSQIKRFAT VHTSDFGEIS DRAEVKLCGI VVTKKEFITK KGERMAFVTL EDLHGSVEVV VLAKVYAKVA QYLEGDDPLL VSGSVEVGEK NTKVIASDIV LLREVNERES RRVHVTVQAT GLERPQLESL KGIINRYPGA CKSFLHIVIP AESKTTIILP DSYKLAASEE LSLDVKNLLG YNAVSFE
|
| |