Gene Gura_2486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGura_2486 
Symbol 
ID5165135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter uraniireducens Rf4 
KingdomBacteria 
Replicon accessionNC_009483 
Strand
Start bp2875646 
End bp2876242 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content48% 
IMG OID640549982 
Productlytic transglycosylase, catalytic 
Protein accessionYP_001231237 
Protein GI148264531 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000427479 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAC AACTGTTGAT GTGCTATGCC ATGTTGTTGG TTACTTTCAC TGCTATTTCG 
TCTTTTGCAG ACATATACAA GTACGAAGAT GAAGAAGGGG TTCTGCATTT CACCGATGCC
CCGACCGACA AGCGCTTTAA AGTATTTATG CGTGATCTGA AAAAGGACAG GAAACTTCGT
ACCACGTTCA GACTCGCCGG ATGTGCAAGA AATCCGGAAG AATTCGAACC GATAATCAAC
GCCTGCGCCC TCGAATACGG TGTGGATAAA TCACTGGTCA AGGCTGTCAT CCACGCGGAG
TCCGGATATA ACCCGACTGC CGTTTCCCCC AAAGGGGCCA GAGGTCTCAT GCAACTCATG
CCGAAAACAG CCCAGGACCT GAAGGTGACC AACTCTCTCG ATCCAGCCGA GAATATTCGC
GGTGGGGTGC GTTATTTAAA ATTTCTTCTT AATACCTTTA AGGGTGATGA AGCGCTGGCC
CTGGCAGCAT ATAATTCCGG TCTCAGCAAG GTAGCCAAAT TCGGGGGAGT TCCTCCCTAC
GAAGAAACCC GCAATTACGT TGCCAAGGTG CTGAATTACA AGAAAAACTA CAAATAA
 
Protein sequence
MKKQLLMCYA MLLVTFTAIS SFADIYKYED EEGVLHFTDA PTDKRFKVFM RDLKKDRKLR 
TTFRLAGCAR NPEEFEPIIN ACALEYGVDK SLVKAVIHAE SGYNPTAVSP KGARGLMQLM
PKTAQDLKVT NSLDPAENIR GGVRYLKFLL NTFKGDEALA LAAYNSGLSK VAKFGGVPPY
EETRNYVAKV LNYKKNYK