| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_2324 |
|---|
| Symbol | |
|---|
| ID | 5165685 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 2685135 |
|---|
| End bp | 2686535 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640549820 |
|---|
| Product | two component, sigma-54 specific, Fis family transcriptional regulator |
|---|
| Protein accession | YP_001231076 |
|---|
| Protein GI | 148264370 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | [TIGR02915] putative PEP-CTERM system response regulator |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0534699 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGC TCTTGATCGT TGATGATGAT AGCGATATTC GCAAGCAGCT TAAATGGGGG
CTTGGAAAAG AATATGACGT TCTGTTTGCT TGCGATGGTG GTGAGGCACT ATCATTGTTC
AAGAAGCACA ATCCTAAAGT TATCACACTG GATCTTGGCT TGCCCCCCGA TGAAGATGGT
ATGGAGGAAG GTTTTAGGTG TCTGAAAGAG ATACTCAGGC ATGTTCCTGC TGCCAAAGTC
ATTGTGATCA CAGGTAATGA CGGACGAAGC AATGCCCTGA GGGCTGTGCA ACTCGGTGCG
TATGATTACT ATCAAAAGCC GATCGATATG AATGAATTGA AGGTCATTAT CAACAGGGCA
TTTTATTTAC TGGACATTGA AGAGGAAAAC AATCGGCTGC AAACCGCACT GGAGCATAAC
GGTACAGGAT TTGGCGGCAT AATCGGACAT TGTCCCCAGA TGTTGCAGGT GTTTTCTACC
ATAAGAAAGG TTGCATCATC TGATATTGCC GTGTTTGTTA CCGGTGAGAG CGGGACGGGC
AAAGAACTGG TTGCCAGGGC TCTGCACACC ATGAGTCTTA GAAATGAAGG CCCTTTTATT
CCCATAAACT GCGGTGCGAT ACCGGAAAAT TTGCTTGAAT CTGAATTATT CGGTGCTGAA
AAAGGCGCCT TTACCGGAGC TCATGCACGT GTACAAGGAA AAGCGGAGTA TGCGCACAAG
GGAACCCTGT TTCTCGATGA AATAGGTGAA TTGCCCGGCA ACCTCCAGGT TAAGCTGCTT
CGTTTTCTTC AGGAAAAAGT GTTGCAGCGA GTCGGTGGGC GGGAGGACAT CGCTGTGGAT
GCCAGGATAA TCTCTGCAAC CAATATTGAT ATTTCAAAGG CGATTCAGGA GGGAATTTTC
AGGGAAGACC TGTATTACAG GATAGCGGTA ATCAATATCA ACCTTCCTCC ATTGCGTGAG
CGTGGCGATG ACATCGTGCT CCTGGCGAAT CTCTTTTTGA AAAGATCGAC TGAAGAATTC
AACAAAAAAG TGAAGGGTTT CAGCACGGGT ACCATCAATC TGCTCGAATC ACACCGGTGG
CCGGGTAATG TCAGGGAGCT GGAAAACAGG GTGCAACGAG CTGTTATCAT GTCTGATTCG
TTATTGCTGG AACCCGATGA TCTTGGTTTC ACAGACATGC CGCTACAGCA GCAGATTCCT
GTAGCAGATG TTGTGACATT GAAGGATGCA AGGGACAGAG TTGAGAGAGA AATGATTATT
TATGCCCTGG AGCGCCAGGA AGGAAATATT GCAAAGGCAG CTGAAGCGCT GGGTGTGAGT
AGACCTACTT TTTATGATCT CATGAAAAAA TATAATCTTA ACAAGCTTTC AGCCTTGCAA
GCAAAGCAAG CCCAGTTGTG A
|
|---|
| Protein sequence | MEKLLIVDDD SDIRKQLKWG LGKEYDVLFA CDGGEALSLF KKHNPKVITL DLGLPPDEDG
MEEGFRCLKE ILRHVPAAKV IVITGNDGRS NALRAVQLGA YDYYQKPIDM NELKVIINRA
FYLLDIEEEN NRLQTALEHN GTGFGGIIGH CPQMLQVFST IRKVASSDIA VFVTGESGTG
KELVARALHT MSLRNEGPFI PINCGAIPEN LLESELFGAE KGAFTGAHAR VQGKAEYAHK
GTLFLDEIGE LPGNLQVKLL RFLQEKVLQR VGGREDIAVD ARIISATNID ISKAIQEGIF
REDLYYRIAV ININLPPLRE RGDDIVLLAN LFLKRSTEEF NKKVKGFSTG TINLLESHRW
PGNVRELENR VQRAVIMSDS LLLEPDDLGF TDMPLQQQIP VADVVTLKDA RDRVEREMII
YALERQEGNI AKAAEALGVS RPTFYDLMKK YNLNKLSALQ AKQAQL
|
|---|
| |