Gene Gura_2281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGura_2281 
Symbol 
ID5164479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter uraniireducens Rf4 
KingdomBacteria 
Replicon accessionNC_009483 
Strand
Start bp2640403 
End bp2643078 
Gene Length2676 bp 
Protein Length891 aa 
Translation table11 
GC content58% 
IMG OID640549778 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_001231034 
Protein GI148264328 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00177504 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTTTG AGTTGCGTCT TCGGGAAAGC GAGGAGCTGT TTCATATACA GGTGGAGGGG 
GTGAAGGACT ACGCGGTTTT CATGCTCGAT ACTCAGGGAA ATGTCCTGAA TTGGAATGCG
GGCGCTGAGC GCTTGAAGGG TTATCGGGAC GAGGAGATTA TCGGTAAACA TTTCTCCTGT
TTCTATACCG AAGAGGAGCG GGCTGCCGGC AAGCCCGGAG AAGAACTCAA AAAAGCCGCG
GCCGAGGGGC GGGTTGCAGA TGAGGGGTGG CGGATCCGCA AGGACGGGAG CCGGTTCTGG
GCCGATGTGA TAATAACGGC GCTCCACGAT GAAAACGGGA ACCTGCGGGG GTTCTCAATA
GTGACGCGCG ACAACACCGA ACGAAAAAAG ACGGAAGATG CCCTGCGTTT CAGCGAAGAA
CGTTATCGGG CCTTGTTTCG CGACAACCCG ACCATGATCG TTACCCTCGA TACCAAGTGG
AAGATGCTCT CGGTCAATCC ATTTTGCGCA AGCCAATTGG GCTACACGAC AAATGAACTG
GAAGGTCAAT CGGTACTGAA TCTGTTCCAT GAAGACGACC GCCCTGCCGT GACCGAGCAG
CTACAGATGT GTTTGCGGAA CCCAGATCAG GTGTATCACT GGCAGTTTCG CAAGATCCGC
AAAGACGGGA GCCTGCTCTG GGTGGAGGAA ACAGCGCAGG CGGTGTATGA CCTGGGCGGC
GCGCTCAACG TCCTGGTAGT CAGTCAGGAC ATCACCGAGC GCAAGCGGGC AGAAGAGGAA
CAGGAACAAC TGCTGGTGCA ACTCGACGCT GTCCTGAACA GCATCAACGA AGGAGTTATC
ATCTCCGACC TCGAGGGCAA CGTGCTGACA ATGAACCCGT CGGCACTGGC CATCCACGAA
TATGAAAATG TCGAGCAGGT CCGGCGGCAG CTGCACCTGT ACCAGGAGAC CTTCGAACTG
TCCGACCTTG ATGGACACCC GGTGCCGTTC GAACAATGGC CACAGGCCCG CGCGCTCCGC
GGCGAACGGT TTGCCGACTA CGAGGTGAGC GTCCGACGCA AGGATACGGA TAAATCGTGG
ATCGGCAGCT ATAGCGGCAC ACCTGTGCAG ACCAAGTCGG GTGACATCAT CCTCTCCGTC
GTCACGTTGC GCGACATCAC CGAGCGCAAA CGAGTGGAGG AGGCGCTACG GGAATCGGAG
AACAAGTTCT CCAAGGTCTT CCAAACGACG CCGAGCATCC TCGTCATAAC GTCCCTGGCA
GACGGGAGGT ACCTGGAGGT CAACGAGGCC TTCGAACGGG TGATGGGCTA CCGCCGCGAC
GAGGTGATCG GCCGTACTTC GATGGAGCTC CACATCTGGC AGAACCCGGA AGATCGGGCC
ATTGTACTCC GGATGCTCGC TGAAGGAAAG AAAGTACATG ACATGGAGAT CGGCTTAAGG
AACAAATCGG GAACCATTCT AGTCGGCCTC TATTCGACGG AGATCATCGA AATCGGCGCG
GAACAATGTC TGTTGAACGT GTTGAACGAC ATCACCGCCC GCAAGAAGGC GGAAGAAGAG
CTGCGCCACA GCGAGGAGCG CTATCGCCGT CTCTACAACG ATACCCCGGT CATGCTCCAT
TCCATCGATC ATGACGGGCG GTTGGTCAGC GTCAGCAATT ACTGGCTCGA AACTCTCGGC
TATGAGAGAA GCGAGGTGCT CGGCCGGCTA TCCACGGAAT TTCTCACGGC GGCATCCCGT
TACTACGCCA CCGAGTTTGT TCTTCCCGAA TATTACCGGA CCGGCTCCTG TAAGGAAGTG
CCGTACCAGA TGGTGAAGAA GAACGGCGAG ATCCTGGACG TCCTCCTTTC CGCCATAGCG
GAACGGGACA GCGAGGGGAA GGTCGTCCGC TCGCTCGCCG TCATAGTTGA TGTGACCGAT
CGCAAGCAGG CGGATGAGGA GATCGAACGG CTGAACACCG ACCTGGCGGC ACGGGCCGCC
GAGCTGGAGG CCGCCAACCG GGAACTGGAG GCGTTCAACT ACACGGTTGC CCACGATCTG
CGCAAGCCGT TGACCGTGGT AAACGGCTAT TGCCAGGCAA TCCAGGAGCT GTGTGGCGAC
AAACTCGGCG AGCAGTGCAA GGGTTTCCTC CGGGAGGCTT ACGACGGCAC CTGGCGCATG
AACCGACTTA TCGATGCCCT GCTCAACTTC TCTCGCCTGG CCCACGTTGA GACGCGCCGG
GAAACGGTTG ATTTCTCCGC CATGGCGCAT GAGGTTGCCG CGGAGCTGAA GCTGGCCGAG
CCGAAGCGCC GGGTCACGTT TCTTATCGCC GACGGGGTTA GTGCCGACGG GGATGCCGCC
CTCTTGCGGG TGGTCCTGGA TAACCTCCTC GGCAACGCCT GGAAGTACTC CGGCATGCGG
GAGGAGACGG TCATTGAGTT CAGCGCGACG GAGATCGACG GGATGCCGGT TTATTTCGTC
CGGGACAACG GAGTCGGTTT TAACAAGGCG GACGCGGACA AACTCTTTGT CCCATTCCAG
CGCCTCCCCG GCGCCGAAGA ATGCAAAGGT TTCGGTATCG GTCTGGCCAC GGTGGAGAAG
ATCATCCGGC GCCATGGCGG GAAGGTCTGG GCCAAGGGGG AGCCGGGCAA TGGGGCGACC
TTCTATTTTA CGTTGAGCGG TGACAAAACC ATCTGA
 
Protein sequence
MQFELRLRES EELFHIQVEG VKDYAVFMLD TQGNVLNWNA GAERLKGYRD EEIIGKHFSC 
FYTEEERAAG KPGEELKKAA AEGRVADEGW RIRKDGSRFW ADVIITALHD ENGNLRGFSI
VTRDNTERKK TEDALRFSEE RYRALFRDNP TMIVTLDTKW KMLSVNPFCA SQLGYTTNEL
EGQSVLNLFH EDDRPAVTEQ LQMCLRNPDQ VYHWQFRKIR KDGSLLWVEE TAQAVYDLGG
ALNVLVVSQD ITERKRAEEE QEQLLVQLDA VLNSINEGVI ISDLEGNVLT MNPSALAIHE
YENVEQVRRQ LHLYQETFEL SDLDGHPVPF EQWPQARALR GERFADYEVS VRRKDTDKSW
IGSYSGTPVQ TKSGDIILSV VTLRDITERK RVEEALRESE NKFSKVFQTT PSILVITSLA
DGRYLEVNEA FERVMGYRRD EVIGRTSMEL HIWQNPEDRA IVLRMLAEGK KVHDMEIGLR
NKSGTILVGL YSTEIIEIGA EQCLLNVLND ITARKKAEEE LRHSEERYRR LYNDTPVMLH
SIDHDGRLVS VSNYWLETLG YERSEVLGRL STEFLTAASR YYATEFVLPE YYRTGSCKEV
PYQMVKKNGE ILDVLLSAIA ERDSEGKVVR SLAVIVDVTD RKQADEEIER LNTDLAARAA
ELEAANRELE AFNYTVAHDL RKPLTVVNGY CQAIQELCGD KLGEQCKGFL REAYDGTWRM
NRLIDALLNF SRLAHVETRR ETVDFSAMAH EVAAELKLAE PKRRVTFLIA DGVSADGDAA
LLRVVLDNLL GNAWKYSGMR EETVIEFSAT EIDGMPVYFV RDNGVGFNKA DADKLFVPFQ
RLPGAEECKG FGIGLATVEK IIRRHGGKVW AKGEPGNGAT FYFTLSGDKT I