Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_2183 |
Symbol | |
ID | 5164298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | - |
Start bp | 2542551 |
End bp | 2543657 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640549680 |
Product | riboflavin biosynthesis protein RibD |
Protein accession | YP_001230943 |
Protein GI | 148264237 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0117] Pyrimidine deaminase [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain [TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000221652 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACATT TTCACGAAAA AATGATGAAA CGCGCCATTG TCCTGGCGAA ACGGGGGATT GGCAGAACTG CGCCGAACCC GACGGTAGGG TGCGTGATTG TTAAAGACGG CGCGGTTGTG GGGGAGGGGT GGCATAAAAA GGCCGGTACC CCCCATGCCG AGGTCCATGC GTTGCGACAA GCCGGCGAAA TGGCCCGGGG CGCCGATGTC TATGTCACCC TTGAACCGTG CGCCCACTTC GGAAAGACTC CGCCTTGCGC GGATGCACTC ATAGCGGCGA AGGTGTGCAG GGTCCATATC GGCATGGTTG ATCCCAATCC CAGGGTATGC GGCGAGGGGA TCTCGATGCT CCGCTCGGCC GGCATTGAGG TCGTCGTTTC CGTCCTTGAG GATAACTGCC GCTCGTTGAA CGAGCCTTTC ATCAAGCATA TGACCACCGG CCTTCCTTTT GTCATCCTGA AAAGCGCCAT GACGCTGGAC GGGAAAACAG CCACAGCCGG TAAAGACTCC AAATGGATAA CCAGTGATAA ATCAAGGCAA TATGTTCACA AACTTCGAGC AAAGCTTGAT GCGATAATGG TGGGGGTCGG CACCGTCATG GCAGATGACC CGCTTCTTAC CTCCAGAATT CCCGCCGGCA GGGACCCGCT GCGCGTTATT GTCGACTCCA CCTTGCGAAT TCCACTGTCA TCGCAGGTTC TTCATGTCGA CTCCCCTGCT AAAACGGTTA TTGCCACGAT TTCCGACGAT GAAGCGCAGG CTGCCCGGAT AACGGCTTCT GGTGCCGACG TCCTGCGCTG TCGGCAGAAG AATGGCCGCG TTGATCTCCA CGATTTGTTC GTCAAGCTCG GCGGACTGGG GGTGCAGTCG CTTCTCCTCG AAGGGGGAGG AGCGCTTGCC GGTGAAGCGC TGCGTTGCGG GTTGATCGAC AAGTGCATGT TTTTCTATGC GCCGAAATTG GTCGGCGGCG AAGGTTTAGG CCCATTCTCC GGCAAAGGGG TAGAGCTTAT GGCCGATGCA ATAACGCTGA AAAACATTTC CATTACTAAG ATAGGAAGCG ATATCCTCGT CCAGGGGTAT CCGGAGAACG CATGTTTACA GGTCTGA
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Protein sequence | MEHFHEKMMK RAIVLAKRGI GRTAPNPTVG CVIVKDGAVV GEGWHKKAGT PHAEVHALRQ AGEMARGADV YVTLEPCAHF GKTPPCADAL IAAKVCRVHI GMVDPNPRVC GEGISMLRSA GIEVVVSVLE DNCRSLNEPF IKHMTTGLPF VILKSAMTLD GKTATAGKDS KWITSDKSRQ YVHKLRAKLD AIMVGVGTVM ADDPLLTSRI PAGRDPLRVI VDSTLRIPLS SQVLHVDSPA KTVIATISDD EAQAARITAS GADVLRCRQK NGRVDLHDLF VKLGGLGVQS LLLEGGGALA GEALRCGLID KCMFFYAPKL VGGEGLGPFS GKGVELMADA ITLKNISITK IGSDILVQGY PENACLQV
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