Gene Gura_2113 details

Gene Information

• Locus tag: Gura_2113
• ID: 5163351
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter uraniireducens Rf4
• Kingdom: Bacteria
• Replicon accession: NC_009483
• Strand: +
• Start bp: 2467074
• End bp: 2469035
• Gene Length: 1962 bp
• Protein Length: 653 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 640549609
• Product: hypothetical protein
• Protein accession: YP_001230874
• Protein GI: 148264168
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG5010] Flp pilus assembly protein TadD, contains TPR repeats

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000221483
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTCACCAT TTTCTCTCGC GACCCCCGTT TCAAAGCGAG CAAGCCAGCT GCTCGCCATT 
GCGACTGTCC TGACCATCGC CGCCTTCCTG TTTCGCCAGA TCCACGAGAT GGACATCTGG 
TGGCACCTGG CAATCGGCCG CGACATACTG GCCCGCCACG CCATCCCGAT AATAGACAGC 
TTCAGCATAG CCGGAGCAGG CAGGCATTAC CACGACTCCC ACTGGCTGTT CCAGGTGGCT 
GCGGCAGTGA TTCATGGCGC CGGCGGCATG GTCGGAATCC AGCTGTTCAT GGTGCTGACC 
TGGGGGGTGA CGTTATGGTT TTGCTACCGG AGCATGGACA GCACCGTGGC GATGCCGATC 
CGGCTCTTTC TCCTGTTTCT GACCGTAATG GCAGCATCGG AGCGTTTCCG GCCGCGTCCC 
GAGTTGTTCA CGTACCTGAT GATTGCCGTT TTCTTTTTCT CTTTGCGAGA ACGCACGTTC 
CTCACCCGCC GGGGACAACT CCTCATCGGC CTTTTTCAGG TCATCTGGAC CAACAGCCAT 
GGTCTTTTCG TGCTCGGCCC CTTCATGGTA CTCTGTGCCT GGCTGTCGGC TCTTCCGGAC 
CGCTGGAGGG GCAAAAGCAA CGATCTTGTT CCTCTCTCCC GTCTTTTGCT GCTTTGCATG 
TTCGCCACGA TCATCTCCCC GTACGGCTGG GGGACCTGGC GATATGCCTT GCTGTTGGCC 
ACTGAAGTGA AGGGGGGCGG GCCTGCCATA TTCCGCTTCC TCGGAGAGCT GAGCCCGACC 
CTGGGCTTTG ACACCATGTC CAAACCCGCC TTCTGGTTTT TTGCAGCTCT CTTCGTCCTT 
TGCCTGGCTA CAATTATATT TGCCGCATGC CGGGGGCGCA TCCGGACAAA TTGGTTGCCC 
ATGGTTGCAG GCATGGCATT GCTCGCCCTG AGCGGGCGCA GAAACATGGT TCTCTTCGCG 
CTCGTTGCCT CTCCGTTTAT ATGCGACCAA TTGGCAATCC ATGCCTGGCC ACGAAAACCG 
GTATCTGCTC CCATAACTCT GATTGTGGCA GCAGCCGTAC TTTTTTGGGG CTCTCTTCCG 
GTCTCCGGCA TCTACTATAC TTCCTTGCAT CCAAAACCCA CCCGCTTCGG ACTCGGGGCG 
ACGCCTTCCT ATTTCCCCTA TGGCTTGCCG GCTTTTCTTG AGAAAGTTTC TTTCCGGGGG 
CCGATATACA ACTGCAACTT ACTGGGAGGT TTTTATCTGT TTCATGGTTA CCCTGAATTG 
CGCCCGCTGT TCGATGGGCG ATGGGAAGTC TATGACCCGG CCACCCTGGA TGAAATCATG 
GAGGCGGCGT ACAATAAAAA CCTGTGGCAA AAGATGCTCA GTCGATATGA TTTCAAGGGC 
ATACTGCTTC ACCACGATGC AGCAGAGAGT CGCGGCTTGC TCCCCAGTTT GGCGGCGGAC 
CCCATGTGGA GGCTTGTCTA TCTGGATTAT GCCGCCTCTT TCTGGATGAG GAGCGACCAG 
CCGGCGCTTC CCCCTCCTCT CGACCCGGCT CTCGTCGTCA GCAGGCCGGA CCATCCCGTC 
AACTATTACG ATTGCCTGAG TCTCGGGCGG TTTCTCTATT TGACTAATGC CTCCGCCGCC 
CGGATAGCCA ATCTCAACCG CGCCCTCACC CTTGGCGTCG AGCGGGAATT CGTCCTGGAA 
CTGCTTGGAG GGGCGTATCT GGATAGCGCT GATGATGTAA AAGCCGAAGC CGTTTTCACG 
GACCTTTTGC GACAATACCC CCGCAATGTC AAGGCGATGG TGAATATGGC CGTAATCTAC 
GGTAATCGGG GAAACCTGCC GAAGGCAGAA ATGTATCTGA ACGACGCCAT TCTGCATGAT 
CCCGATAATG CAACGGCCAG GTCCAATTTG ACCACACTCC GAAGGATAAA AAAAATGAAT 
GCCGACCTTC TTCTCTCCTT GAACGGAGGA ACTAAGGAGT AG 

 

Protein sequence

MSPFSLATPV SKRASQLLAI ATVLTIAAFL FRQIHEMDIW WHLAIGRDIL ARHAIPIIDS 
FSIAGAGRHY HDSHWLFQVA AAVIHGAGGM VGIQLFMVLT WGVTLWFCYR SMDSTVAMPI 
RLFLLFLTVM AASERFRPRP ELFTYLMIAV FFFSLRERTF LTRRGQLLIG LFQVIWTNSH 
GLFVLGPFMV LCAWLSALPD RWRGKSNDLV PLSRLLLLCM FATIISPYGW GTWRYALLLA 
TEVKGGGPAI FRFLGELSPT LGFDTMSKPA FWFFAALFVL CLATIIFAAC RGRIRTNWLP 
MVAGMALLAL SGRRNMVLFA LVASPFICDQ LAIHAWPRKP VSAPITLIVA AAVLFWGSLP 
VSGIYYTSLH PKPTRFGLGA TPSYFPYGLP AFLEKVSFRG PIYNCNLLGG FYLFHGYPEL 
RPLFDGRWEV YDPATLDEIM EAAYNKNLWQ KMLSRYDFKG ILLHHDAAES RGLLPSLAAD 
PMWRLVYLDY AASFWMRSDQ PALPPPLDPA LVVSRPDHPV NYYDCLSLGR FLYLTNASAA 
RIANLNRALT LGVEREFVLE LLGGAYLDSA DDVKAEAVFT DLLRQYPRNV KAMVNMAVIY 
GNRGNLPKAE MYLNDAILHD PDNATARSNL TTLRRIKKMN ADLLLSLNGG TKE