| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_1492 |
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| Symbol | mnmA |
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| ID | 5163366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | - |
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| Start bp | 1738584 |
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| End bp | 1739711 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640548992 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001230264 |
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| Protein GI | 148263558 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.132482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTAAAAA ACAATAAACG AAAACGGGTC GTCATCGCCA TGAGCGGCGG GGTGGATTCC
TCGGTCGCCG CGGCCCTGCT GAAGGAAGAG GGGCATGAGG TAATCGGCAT CTCCATGCAG
GTCTGGGACT ACACCAGGTT CACGGCCGAG GAAGGGGAAA AGTTCGACAC CTGCTGCTCG
CTGGACGATA TCCACGATGC GCGGCGGGTC GCAGAGCAAC TGGAAATCCC CTTTTACGTG
GTGAACTTCG AGGAAGAGTT CCAGAACCTC GTCATCGACG ACTTCGTCAA CGAGTATCTC
CTCGGACGCA CCCCCAACCC CTGCGTACGA TGCAACCAGT GGATAAAGTT CGAGCTTCTC
CTGAAGAAGG CGCGCGGACT CGGGGCGGAC ATGATCGCCA CCGGCCACTA CGCCAGGACG
GAGCAGGATG CCGACGGCCG TTACCGGCTC ATGAAAGGGG TCGATCCGGC AAAGGACCAG
TCTTATTTCC TCTTCACCCT CACCCAGGAA CAGCTCGCCA TGACCCTCTT TCCACTGGGG
GGGATGACCA AGCAGGAGGT CCGCGCCCTC GCCGCCGGTT ACGGTCTGCG GGTGGCGGAA
AAGGGGGAGA GCCAGGAGAT CTGCTTTGTC CCTGACAACG ACTACGTCCG TTTCATCGAG
GAAGAACGGG GGAAGCAGCT GCTCTCCGGG AACATCGTCG ACAGGAAGGG AAAGGTCCTG
GGGGTGCATG ACGGGACCTA CCGATATACC GTGGGCCAGC GCAAGGGTCT GGGTATCGCC
CACCCGGAAC CGCTCTACGT GCTGGGAGTG GACGCCGCCA GGAAAGAGGT TACGGTAGGC
CCACGTGACG CACTCTACAG CGACGGCCTG ATTGCGACAG CCATCAACTG GATTGCCCCC
ACCCCGGAAA CCGCCATTGA AGCGAGCTGC AAGATCAGGT ACCGCCACCA CCCCATCCCG
TGCCGTATTC TTCCCCTTGC CGACAACCGC GCAGAGGTGC GTTTCACGGA ACGGGAAAAG
TCCGTCACCC CCGGCCAGGC AGTGGTCTTT TACGACGGAG ACACAGTGCT CGGCGGCGGC
TGGATCGAAC ATGCAGTGAA CACAAAAACG GCAGTTAGCC ACGAATGA
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| Protein sequence | MVKNNKRKRV VIAMSGGVDS SVAAALLKEE GHEVIGISMQ VWDYTRFTAE EGEKFDTCCS
LDDIHDARRV AEQLEIPFYV VNFEEEFQNL VIDDFVNEYL LGRTPNPCVR CNQWIKFELL
LKKARGLGAD MIATGHYART EQDADGRYRL MKGVDPAKDQ SYFLFTLTQE QLAMTLFPLG
GMTKQEVRAL AAGYGLRVAE KGESQEICFV PDNDYVRFIE EERGKQLLSG NIVDRKGKVL
GVHDGTYRYT VGQRKGLGIA HPEPLYVLGV DAARKEVTVG PRDALYSDGL IATAINWIAP
TPETAIEASC KIRYRHHPIP CRILPLADNR AEVRFTEREK SVTPGQAVVF YDGDTVLGGG
WIEHAVNTKT AVSHE
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